Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.53□□□□□ -0.24
UbbP0CG49 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.53□□□□□ -0.24
UbbP0CG49 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UbbP0CG49 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
UbbP0CG49 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.53□□□□□ -0.24
UbbP0CG49 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.53□□□□□ -0.24
UbbP0CG49 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UbbP0CG49 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UbbP0CG49 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
UbbP0CG49 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.53□□□□□ -0.24
UbbP0CG49 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
UbbP0CG49 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UbbP0CG49 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UbbP0CG49 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.53□□□□□ -0.24
UbbP0CG49 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UbbP0CG49 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
UbbP0CG49 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UbbP0CG49 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
UbbP0CG49 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UbbP0CG49 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
UbbP0CG49 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UbbP0CG49 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UbbP0CG49 Gm11355-201ENSMUST00000121120 306 ntBASIC13.52□□□□□ -0.25
UbbP0CG49 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.52□□□□□ -0.25
UbbP0CG49 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.52□□□□□ -0.25
UbbP0CG49 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
UbbP0CG49 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
UbbP0CG49 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
UbbP0CG49 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UbbP0CG49 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UbbP0CG49 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.51□□□□□ -0.25
UbbP0CG49 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.51□□□□□ -0.25
UbbP0CG49 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.51□□□□□ -0.25
UbbP0CG49 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UbbP0CG49 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
UbbP0CG49 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.51□□□□□ -0.25
UbbP0CG49 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.51□□□□□ -0.25
UbbP0CG49 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
UbbP0CG49 Gm21559-201ENSMUST00000220638 855 ntBASIC13.51□□□□□ -0.25
UbbP0CG49 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.51□□□□□ -0.25
UbbP0CG49 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
UbbP0CG49 Gm8587-201ENSMUST00000076538 843 ntBASIC13.51□□□□□ -0.25
UbbP0CG49 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.51□□□□□ -0.25
UbbP0CG49 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UbbP0CG49 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.5□□□□□ -0.25
UbbP0CG49 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.5□□□□□ -0.25
UbbP0CG49 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UbbP0CG49 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.5□□□□□ -0.25
UbbP0CG49 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UbbP0CG49 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms