Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.65□□□□□ -0.22
P04224 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.65□□□□□ -0.22
P04224 Odf3b-204ENSMUST00000227834 930 ntBASIC13.65□□□□□ -0.22
P04224 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.65□□□□□ -0.22
P04224 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
P04224 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
P04224 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04224 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
P04224 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
P04224 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.64□□□□□ -0.23
P04224 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.64□□□□□ -0.23
P04224 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.64□□□□□ -0.23
P04224 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
P04224 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.64□□□□□ -0.23
P04224 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
P04224 Gm29257-201ENSMUST00000186115 639 ntBASIC13.64□□□□□ -0.23
P04224 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.64□□□□□ -0.23
P04224 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P04224 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
P04224 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P04224 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04224 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
P04224 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
P04224 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.63□□□□□ -0.23
P04224 Gm715-201ENSMUST00000117865 831 ntBASIC13.63□□□□□ -0.23
P04224 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.63□□□□□ -0.23
P04224 Gm27463-201ENSMUST00000183569 57 ntBASIC13.63□□□□□ -0.23
P04224 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.63□□□□□ -0.23
P04224 Gm3375-201ENSMUST00000203929 796 ntBASIC13.63□□□□□ -0.23
P04224 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.63□□□□□ -0.23
P04224 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.63□□□□□ -0.23
P04224 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Phf7-203ENSMUST00000226565 1971 ntBASIC13.63□□□□□ -0.23
P04224 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04224 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
P04224 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.63□□□□□ -0.23
P04224 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
P04224 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
P04224 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
P04224 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms