Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm15483-201ENSMUST00000120338 456 ntBASIC16.17■□□□□ 0.18
P04214 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
P04214 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.17■□□□□ 0.18
P04214 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.17■□□□□ 0.18
P04214 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.17■□□□□ 0.18
P04214 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P04214 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.17■□□□□ 0.18
P04214 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.17■□□□□ 0.18
P04214 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04214 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.17■□□□□ 0.18
P04214 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
P04214 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
P04214 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04214 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.16■□□□□ 0.18
P04214 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P04214 Gm13015-201ENSMUST00000118674 204 ntBASIC16.16■□□□□ 0.18
P04214 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.16■□□□□ 0.18
P04214 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.16■□□□□ 0.18
P04214 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04214 Gm25144-201ENSMUST00000179561 110 ntBASIC16.16■□□□□ 0.18
P04214 Gm25352-201ENSMUST00000179815 110 ntBASIC16.16■□□□□ 0.18
P04214 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.16■□□□□ 0.18
P04214 Gm43767-201ENSMUST00000198933 381 ntBASIC16.16■□□□□ 0.18
P04214 Gm7730-201ENSMUST00000212486 454 ntBASIC16.16■□□□□ 0.18
P04214 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04214 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
P04214 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04214 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04214 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
P04214 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P04214 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
P04214 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.15■□□□□ 0.18
P04214 Gm28630-201ENSMUST00000187806 498 ntBASIC16.15■□□□□ 0.18
P04214 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Gm18049-201ENSMUST00000208909 581 ntBASIC16.15■□□□□ 0.18
P04214 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04214 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.14■□□□□ 0.18
P04214 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.14■□□□□ 0.17
P04214 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.14■□□□□ 0.17
P04214 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.14■□□□□ 0.17
P04214 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
P04214 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
P04214 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
P04214 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
P04214 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04214 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04214 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04214 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04214 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04214 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
P04214 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.13■□□□□ 0.17
P04214 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P04214 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms