Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Vamp8O70404 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.95□□□□□ -0.66
Vamp8O70404 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Vamp8O70404 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Vamp8O70404 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vamp8O70404 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Vamp8O70404 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Vamp8O70404 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.94□□□□□ -0.66
Vamp8O70404 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Nespas-201ENSMUST00000143738 1083 ntBASIC10.94□□□□□ -0.66
Vamp8O70404 Gm27000-201ENSMUST00000182943 842 ntBASIC10.94□□□□□ -0.66
Vamp8O70404 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Vamp8O70404 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.94□□□□□ -0.66
Vamp8O70404 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Gm10654-201ENSMUST00000098653 1633 ntBASIC10.94□□□□□ -0.66
Vamp8O70404 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.94□□□□□ -0.66
Vamp8O70404 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vamp8O70404 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vamp8O70404 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vamp8O70404 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Efs-202ENSMUST00000227037 2540 ntBASIC10.93□□□□□ -0.66
Vamp8O70404 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Vamp8O70404 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vamp8O70404 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Gm6420-201ENSMUST00000193885 723 ntBASIC10.93□□□□□ -0.66
Vamp8O70404 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Vamp8O70404 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.93□□□□□ -0.66
Vamp8O70404 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vamp8O70404 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vamp8O70404 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Vamp8O70404 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vamp8O70404 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vamp8O70404 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms