Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Pdlim3O70209 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.09□□□□□ -0.15
Pdlim3O70209 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pdlim3O70209 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim3O70209 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim3O70209 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Pdlim3O70209 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim3O70209 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim3O70209 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Pdlim3O70209 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.08□□□□□ -0.15
Pdlim3O70209 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pdlim3O70209 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim3O70209 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim3O70209 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim3O70209 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim3O70209 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim3O70209 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim3O70209 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim3O70209 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.07□□□□□ -0.16
Pdlim3O70209 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pdlim3O70209 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdlim3O70209 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Gm7367-201ENSMUST00000057611 492 ntBASIC14.07□□□□□ -0.16
Pdlim3O70209 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim3O70209 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.07□□□□□ -0.16
Pdlim3O70209 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdlim3O70209 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdlim3O70209 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim3O70209 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim3O70209 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms