Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Pde6dO55057 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pde6dO55057 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.28□□□□□ -0.44
Pde6dO55057 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pde6dO55057 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Pde6dO55057 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Pde6dO55057 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.28□□□□□ -0.44
Pde6dO55057 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Gm38027-201ENSMUST00000192315 235 ntBASIC12.28□□□□□ -0.44
Pde6dO55057 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pde6dO55057 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pde6dO55057 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.28□□□□□ -0.44
Pde6dO55057 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pde6dO55057 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pde6dO55057 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.27□□□□□ -0.45
Pde6dO55057 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pde6dO55057 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.27□□□□□ -0.45
Pde6dO55057 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.27□□□□□ -0.45
Pde6dO55057 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.27□□□□□ -0.45
Pde6dO55057 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pde6dO55057 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.27□□□□□ -0.45
Pde6dO55057 Gm44450-201ENSMUST00000199528 114 ntBASIC12.27□□□□□ -0.45
Pde6dO55057 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.27□□□□□ -0.45
Pde6dO55057 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Gm5874-201ENSMUST00000096101 508 ntBASIC12.27□□□□□ -0.45
Pde6dO55057 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pde6dO55057 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pde6dO55057 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pde6dO55057 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pde6dO55057 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pde6dO55057 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.26□□□□□ -0.45
Pde6dO55057 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pde6dO55057 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Gm18666-201ENSMUST00000190039 958 ntBASIC12.26□□□□□ -0.45
Pde6dO55057 Gm18421-201ENSMUST00000204122 625 ntBASIC12.26□□□□□ -0.45
Pde6dO55057 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pde6dO55057 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pde6dO55057 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pde6dO55057 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms