Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.47■□□□□ 0.39
Stx1aO35526 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.47■□□□□ 0.39
Stx1aO35526 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Stx1aO35526 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Mir770-201ENSMUST00000103252 94 ntBASIC17.46■□□□□ 0.39
Stx1aO35526 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Stx1aO35526 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.46■□□□□ 0.39
Stx1aO35526 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Stx1aO35526 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Stx1aO35526 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stx1aO35526 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Stx1aO35526 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Stx1aO35526 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Stx1aO35526 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Stx1aO35526 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.45■□□□□ 0.38
Stx1aO35526 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.45■□□□□ 0.38
Stx1aO35526 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Stx1aO35526 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.45■□□□□ 0.38
Stx1aO35526 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.45■□□□□ 0.38
Stx1aO35526 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Stx1aO35526 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.45■□□□□ 0.38
Stx1aO35526 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.45■□□□□ 0.38
Stx1aO35526 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Stx1aO35526 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stx1aO35526 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Stx1aO35526 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Stx1aO35526 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
Stx1aO35526 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Stx1aO35526 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Stx1aO35526 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.44■□□□□ 0.38
Stx1aO35526 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.44■□□□□ 0.38
Stx1aO35526 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.44■□□□□ 0.38
Stx1aO35526 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.44■□□□□ 0.38
Stx1aO35526 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stx1aO35526 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Stx1aO35526 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Stx1aO35526 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Stx1aO35526 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.43■□□□□ 0.38
Stx1aO35526 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.43■□□□□ 0.38
Stx1aO35526 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.43■□□□□ 0.38
Stx1aO35526 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.43■□□□□ 0.38
Stx1aO35526 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.43■□□□□ 0.38
Stx1aO35526 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stx1aO35526 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms