Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.15□□□□□ -0.46
Tnfsf11O35235 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf11O35235 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.15□□□□□ -0.46
Tnfsf11O35235 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf11O35235 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.14□□□□□ -0.47
Tnfsf11O35235 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.14□□□□□ -0.47
Tnfsf11O35235 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Odf3b-204ENSMUST00000227834 930 ntBASIC12.14□□□□□ -0.47
Tnfsf11O35235 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf11O35235 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.13□□□□□ -0.47
Tnfsf11O35235 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Gm8520-201ENSMUST00000186517 868 ntBASIC12.13□□□□□ -0.47
Tnfsf11O35235 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.13□□□□□ -0.47
Tnfsf11O35235 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.13□□□□□ -0.47
Tnfsf11O35235 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf11O35235 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf11O35235 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms