Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Mir3081-201ENSMUST00000175305 84 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm8825-201ENSMUST00000182565 998 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm4518-201ENSMUST00000182638 718 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm9172-201ENSMUST00000212092 954 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh9F8VPK8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh9F8VPK8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Olfr129-201ENSMUST00000122318 993 ntBASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh9F8VPK8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh9F8VPK8 Gm14859-201ENSMUST00000117752 357 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms