Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.58■□□□□ 0.56
Ube4aE9Q735 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Gm43474-201ENSMUST00000196415 774 ntBASIC18.58■□□□□ 0.56
Ube4aE9Q735 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.58■□□□□ 0.56
Ube4aE9Q735 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.58■□□□□ 0.56
Ube4aE9Q735 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4aE9Q735 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ube4aE9Q735 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.58■□□□□ 0.56
Ube4aE9Q735 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Gm13616-201ENSMUST00000120600 222 ntBASIC18.57■□□□□ 0.56
Ube4aE9Q735 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.57■□□□□ 0.56
Ube4aE9Q735 Mir6956-201ENSMUST00000183598 62 ntBASIC18.57■□□□□ 0.56
Ube4aE9Q735 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4aE9Q735 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.56■□□□□ 0.56
Ube4aE9Q735 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.56■□□□□ 0.56
Ube4aE9Q735 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Gm18057-201ENSMUST00000208220 503 ntBASIC18.56■□□□□ 0.56
Ube4aE9Q735 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ube4aE9Q735 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.55■□□□□ 0.56
Ube4aE9Q735 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ube4aE9Q735 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ube4aE9Q735 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms