Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cpsf4lE9Q2N0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpsf4lE9Q2N0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Gm7230-201ENSMUST00000173026 815 ntBASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpsf4lE9Q2N0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Gm15173-201ENSMUST00000122049 433 ntBASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4lE9Q2N0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4lE9Q2N0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4lE9Q2N0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4lE9Q2N0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms