Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gm6659-201ENSMUST00000174752 547 ntBASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gm23634-201ENSMUST00000175071 91 ntBASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.68□□□□□ -0.54
Gm5878E9PUB3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm5878E9PUB3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 AA414768-201ENSMUST00000121924 1257 ntBASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Gm5878E9PUB3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm5878E9PUB3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms