Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm27389-201ENSMUST00000183622 195 ntBASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm10052-201ENSMUST00000168019 960 ntBASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm45058-201ENSMUST00000205810 766 ntBASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm7729-201ENSMUST00000050143 801 ntBASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms