Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.78□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3n-3A0A0G2JEM0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm7791-201ENSMUST00000219066 539 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms