Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm43697-201ENSMUST00000199637 2581 ntBASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm44291-201ENSMUST00000203102 2865 ntBASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm5643-201ENSMUST00000117081 966 ntBASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv3A0A0A6YYE2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm10698-201ENSMUST00000182663 604 ntBASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.98□□□□□ -0.49
Trbv3A0A0A6YYE2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms