Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.04□□□□□ -0.48
Trav16A0A075B653 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16A0A075B653 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 BC037039-201ENSMUST00000192003 2205 ntBASIC12.03□□□□□ -0.48
Trav16A0A075B653 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Gm11336-201ENSMUST00000118168 334 ntBASIC12.03□□□□□ -0.48
Trav16A0A075B653 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.03□□□□□ -0.48
Trav16A0A075B653 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.03□□□□□ -0.48
Trav16A0A075B653 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.03□□□□□ -0.48
Trav16A0A075B653 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16A0A075B653 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav16A0A075B653 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.02□□□□□ -0.48
Trav16A0A075B653 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav16A0A075B653 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.02□□□□□ -0.49
Trav16A0A075B653 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.02□□□□□ -0.49
Trav16A0A075B653 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.02□□□□□ -0.49
Trav16A0A075B653 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16A0A075B653 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms