Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trav4n-4A0A075B615 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav4n-4A0A075B615 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Gm12382-201ENSMUST00000122005 922 ntBASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav4n-4A0A075B615 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms