Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb3S4R1G7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.3■□□□□ 0.84
H2afb3S4R1G7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb3S4R1G7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb3S4R1G7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb3S4R1G7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb3S4R1G7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.29■□□□□ 0.84
H2afb3S4R1G7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
H2afb3S4R1G7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb3S4R1G7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb3S4R1G7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.28■□□□□ 0.84
H2afb3S4R1G7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb3S4R1G7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb3S4R1G7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2afb3S4R1G7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
H2afb3S4R1G7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb3S4R1G7 Gm6821-201ENSMUST00000107540 542 ntBASIC20.26■□□□□ 0.83
H2afb3S4R1G7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.26■□□□□ 0.83
H2afb3S4R1G7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
H2afb3S4R1G7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb3S4R1G7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb3S4R1G7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb3S4R1G7 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.25■□□□□ 0.83
H2afb3S4R1G7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
H2afb3S4R1G7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb3S4R1G7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb3S4R1G7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.24■□□□□ 0.83
H2afb3S4R1G7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
H2afb3S4R1G7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
H2afb3S4R1G7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb3S4R1G7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.23■□□□□ 0.83
H2afb3S4R1G7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb3S4R1G7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb3S4R1G7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb3S4R1G7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb3S4R1G7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb3S4R1G7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H2afb3S4R1G7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb3S4R1G7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb3S4R1G7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
H2afb3S4R1G7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb3S4R1G7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb3S4R1G7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb3S4R1G7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.19■□□□□ 0.82
H2afb3S4R1G7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb3S4R1G7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb3S4R1G7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb3S4R1G7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb3S4R1G7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb3S4R1G7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb3S4R1G7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb3S4R1G7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb3S4R1G7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
H2afb3S4R1G7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.15■□□□□ 0.82
H2afb3S4R1G7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb3S4R1G7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.15■□□□□ 0.82
H2afb3S4R1G7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
H2afb3S4R1G7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
H2afb3S4R1G7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb3S4R1G7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb3S4R1G7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb3S4R1G7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb3S4R1G7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb3S4R1G7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb3S4R1G7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
H2afb3S4R1G7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb3S4R1G7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb3S4R1G7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb3S4R1G7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
H2afb3S4R1G7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb3S4R1G7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
H2afb3S4R1G7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb3S4R1G7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb3S4R1G7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb3S4R1G7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb3S4R1G7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
H2afb3S4R1G7 Gm8503-201ENSMUST00000118131 455 ntBASIC20.09■□□□□ 0.81
H2afb3S4R1G7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.09■□□□□ 0.81
H2afb3S4R1G7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms