Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4bQ9JI43 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4bQ9JI43 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4bQ9JI43 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4bQ9JI43 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4bQ9JI43 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4bQ9JI43 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4bQ9JI43 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.23■□□□□ 0.51
Rhox4bQ9JI43 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4bQ9JI43 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4bQ9JI43 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4bQ9JI43 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4bQ9JI43 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4bQ9JI43 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4bQ9JI43 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rhox4bQ9JI43 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4bQ9JI43 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4bQ9JI43 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4bQ9JI43 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rhox4bQ9JI43 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Rhox4bQ9JI43 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rhox4bQ9JI43 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rhox4bQ9JI43 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rhox4bQ9JI43 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rhox4bQ9JI43 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rhox4bQ9JI43 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rhox4bQ9JI43 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rhox4bQ9JI43 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rhox4bQ9JI43 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rhox4bQ9JI43 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rhox4bQ9JI43 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rhox4bQ9JI43 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rhox4bQ9JI43 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rhox4bQ9JI43 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rhox4bQ9JI43 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rhox4bQ9JI43 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rhox4bQ9JI43 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.16■□□□□ 0.5
Rhox4bQ9JI43 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rhox4bQ9JI43 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rhox4bQ9JI43 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rhox4bQ9JI43 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rhox4bQ9JI43 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rhox4bQ9JI43 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rhox4bQ9JI43 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhox4bQ9JI43 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhox4bQ9JI43 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rhox4bQ9JI43 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 Notumos-201ENSMUST00000151998 2659 ntBASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhox4bQ9JI43 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rhox4bQ9JI43 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rhox4bQ9JI43 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rhox4bQ9JI43 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rhox4bQ9JI43 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.11■□□□□ 0.49
Rhox4bQ9JI43 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhox4bQ9JI43 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rhox4bQ9JI43 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhox4bQ9JI43 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rhox4bQ9JI43 Gm8109-201ENSMUST00000194076 746 ntBASIC18.09■□□□□ 0.49
Rhox4bQ9JI43 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhox4bQ9JI43 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rhox4bQ9JI43 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rhox4bQ9JI43 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhox4bQ9JI43 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhox4bQ9JI43 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rhox4bQ9JI43 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms