Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clca3a2Q9EQR4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clca3a2Q9EQR4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clca3a2Q9EQR4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clca3a2Q9EQR4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clca3a2Q9EQR4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clca3a2Q9EQR4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Clca3a2Q9EQR4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clca3a2Q9EQR4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clca3a2Q9EQR4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clca3a2Q9EQR4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clca3a2Q9EQR4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clca3a2Q9EQR4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clca3a2Q9EQR4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clca3a2Q9EQR4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clca3a2Q9EQR4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clca3a2Q9EQR4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clca3a2Q9EQR4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clca3a2Q9EQR4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.69■■□□□ 1.06
Clca3a2Q9EQR4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clca3a2Q9EQR4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.68■■□□□ 1.06
Clca3a2Q9EQR4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.68■■□□□ 1.06
Clca3a2Q9EQR4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clca3a2Q9EQR4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clca3a2Q9EQR4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clca3a2Q9EQR4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Clca3a2Q9EQR4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.67■■□□□ 1.06
Clca3a2Q9EQR4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clca3a2Q9EQR4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clca3a2Q9EQR4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clca3a2Q9EQR4 Gm6311-201ENSMUST00000073790 878 ntBASIC21.66■■□□□ 1.06
Clca3a2Q9EQR4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clca3a2Q9EQR4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clca3a2Q9EQR4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Clca3a2Q9EQR4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.65■■□□□ 1.06
Clca3a2Q9EQR4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.65■■□□□ 1.06
Clca3a2Q9EQR4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Clca3a2Q9EQR4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Clca3a2Q9EQR4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clca3a2Q9EQR4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clca3a2Q9EQR4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clca3a2Q9EQR4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clca3a2Q9EQR4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clca3a2Q9EQR4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clca3a2Q9EQR4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clca3a2Q9EQR4 Terc-201ENSMUST00000082862 423 ntBASIC21.63■■□□□ 1.05
Clca3a2Q9EQR4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clca3a2Q9EQR4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clca3a2Q9EQR4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Clca3a2Q9EQR4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clca3a2Q9EQR4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.62■■□□□ 1.05
Clca3a2Q9EQR4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clca3a2Q9EQR4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clca3a2Q9EQR4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.6■■□□□ 1.05
Clca3a2Q9EQR4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clca3a2Q9EQR4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Clca3a2Q9EQR4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Clca3a2Q9EQR4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clca3a2Q9EQR4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Clca3a2Q9EQR4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.59■■□□□ 1.05
Clca3a2Q9EQR4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clca3a2Q9EQR4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clca3a2Q9EQR4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clca3a2Q9EQR4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clca3a2Q9EQR4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clca3a2Q9EQR4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.58■■□□□ 1.04
Clca3a2Q9EQR4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Clca3a2Q9EQR4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clca3a2Q9EQR4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clca3a2Q9EQR4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms