Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk3bl1Q9D701 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk3bl1Q9D701 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk3bl1Q9D701 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk3bl1Q9D701 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk3bl1Q9D701 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk3bl1Q9D701 Particl-201ENSMUST00000205370 1560 ntBASIC20.7■□□□□ 0.9
Upk3bl1Q9D701 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk3bl1Q9D701 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk3bl1Q9D701 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk3bl1Q9D701 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk3bl1Q9D701 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk3bl1Q9D701 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Upk3bl1Q9D701 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk3bl1Q9D701 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk3bl1Q9D701 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk3bl1Q9D701 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Upk3bl1Q9D701 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk3bl1Q9D701 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk3bl1Q9D701 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk3bl1Q9D701 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk3bl1Q9D701 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.66■□□□□ 0.9
Upk3bl1Q9D701 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk3bl1Q9D701 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Upk3bl1Q9D701 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Upk3bl1Q9D701 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk3bl1Q9D701 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Upk3bl1Q9D701 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk3bl1Q9D701 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bl1Q9D701 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bl1Q9D701 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bl1Q9D701 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bl1Q9D701 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bl1Q9D701 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bl1Q9D701 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bl1Q9D701 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk3bl1Q9D701 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Upk3bl1Q9D701 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Upk3bl1Q9D701 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.61■□□□□ 0.89
Upk3bl1Q9D701 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.6■□□□□ 0.89
Upk3bl1Q9D701 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk3bl1Q9D701 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk3bl1Q9D701 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk3bl1Q9D701 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk3bl1Q9D701 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
Upk3bl1Q9D701 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Upk3bl1Q9D701 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Upk3bl1Q9D701 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Upk3bl1Q9D701 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Upk3bl1Q9D701 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Upk3bl1Q9D701 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk3bl1Q9D701 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.58■□□□□ 0.88
Upk3bl1Q9D701 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.58■□□□□ 0.88
Upk3bl1Q9D701 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk3bl1Q9D701 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Upk3bl1Q9D701 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk3bl1Q9D701 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk3bl1Q9D701 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk3bl1Q9D701 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk3bl1Q9D701 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Upk3bl1Q9D701 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk3bl1Q9D701 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.54■□□□□ 0.88
Upk3bl1Q9D701 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Upk3bl1Q9D701 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Upk3bl1Q9D701 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.54■□□□□ 0.88
Upk3bl1Q9D701 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bl1Q9D701 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bl1Q9D701 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Upk3bl1Q9D701 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk3bl1Q9D701 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Upk3bl1Q9D701 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms