Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Upk1aQ9D132 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Upk1aQ9D132 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Upk1aQ9D132 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Upk1aQ9D132 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Upk1aQ9D132 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Upk1aQ9D132 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Upk1aQ9D132 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Upk1aQ9D132 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Upk1aQ9D132 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Upk1aQ9D132 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Upk1aQ9D132 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Upk1aQ9D132 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Upk1aQ9D132 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Upk1aQ9D132 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Upk1aQ9D132 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Upk1aQ9D132 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Upk1aQ9D132 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Upk1aQ9D132 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Upk1aQ9D132 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upk1aQ9D132 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upk1aQ9D132 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upk1aQ9D132 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upk1aQ9D132 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Upk1aQ9D132 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Upk1aQ9D132 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Upk1aQ9D132 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.67■■□□□ 1.06
Upk1aQ9D132 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.66■■□□□ 1.06
Upk1aQ9D132 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upk1aQ9D132 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Upk1aQ9D132 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Upk1aQ9D132 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upk1aQ9D132 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Upk1aQ9D132 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Upk1aQ9D132 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upk1aQ9D132 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upk1aQ9D132 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upk1aQ9D132 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upk1aQ9D132 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.62■■□□□ 1.05
Upk1aQ9D132 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upk1aQ9D132 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Upk1aQ9D132 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Upk1aQ9D132 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Upk1aQ9D132 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.61■■□□□ 1.05
Upk1aQ9D132 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.61■■□□□ 1.05
Upk1aQ9D132 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.6■■□□□ 1.05
Upk1aQ9D132 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upk1aQ9D132 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Upk1aQ9D132 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upk1aQ9D132 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upk1aQ9D132 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Upk1aQ9D132 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.59■■□□□ 1.05
Upk1aQ9D132 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.58■■□□□ 1.05
Upk1aQ9D132 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Upk1aQ9D132 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upk1aQ9D132 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upk1aQ9D132 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upk1aQ9D132 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upk1aQ9D132 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upk1aQ9D132 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upk1aQ9D132 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Upk1aQ9D132 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upk1aQ9D132 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upk1aQ9D132 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Upk1aQ9D132 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Upk1aQ9D132 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upk1aQ9D132 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upk1aQ9D132 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Upk1aQ9D132 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Upk1aQ9D132 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Upk1aQ9D132 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.55■■□□□ 1.04
Upk1aQ9D132 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upk1aQ9D132 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upk1aQ9D132 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Upk1aQ9D132 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Upk1aQ9D132 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.54■■□□□ 1.04
Upk1aQ9D132 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Upk1aQ9D132 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Upk1aQ9D132 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Upk1aQ9D132 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Upk1aQ9D132 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Upk1aQ9D132 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.53■■□□□ 1.04
Upk1aQ9D132 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms