Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ndufs4Q9CXZ1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ndufs4Q9CXZ1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ndufs4Q9CXZ1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndufs4Q9CXZ1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ndufs4Q9CXZ1 Gm9812-201ENSMUST00000061934 968 ntBASIC21.67■■□□□ 1.06
Ndufs4Q9CXZ1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndufs4Q9CXZ1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ndufs4Q9CXZ1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ndufs4Q9CXZ1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ndufs4Q9CXZ1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ndufs4Q9CXZ1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.65■■□□□ 1.06
Ndufs4Q9CXZ1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.65■■□□□ 1.06
Ndufs4Q9CXZ1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ndufs4Q9CXZ1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.65■■□□□ 1.06
Ndufs4Q9CXZ1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ndufs4Q9CXZ1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndufs4Q9CXZ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ndufs4Q9CXZ1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndufs4Q9CXZ1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufs4Q9CXZ1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Ndufs4Q9CXZ1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ndufs4Q9CXZ1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ndufs4Q9CXZ1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ndufs4Q9CXZ1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ndufs4Q9CXZ1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ndufs4Q9CXZ1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ndufs4Q9CXZ1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.6■■□□□ 1.05
Ndufs4Q9CXZ1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ndufs4Q9CXZ1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ndufs4Q9CXZ1 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.59■■□□□ 1.05
Ndufs4Q9CXZ1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ndufs4Q9CXZ1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ndufs4Q9CXZ1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ndufs4Q9CXZ1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ndufs4Q9CXZ1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Ndufs4Q9CXZ1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ndufs4Q9CXZ1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ndufs4Q9CXZ1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufs4Q9CXZ1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.55■■□□□ 1.04
Ndufs4Q9CXZ1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufs4Q9CXZ1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufs4Q9CXZ1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufs4Q9CXZ1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufs4Q9CXZ1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.54■■□□□ 1.04
Ndufs4Q9CXZ1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ndufs4Q9CXZ1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ndufs4Q9CXZ1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.54■■□□□ 1.04
Ndufs4Q9CXZ1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ndufs4Q9CXZ1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ndufs4Q9CXZ1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ndufs4Q9CXZ1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ndufs4Q9CXZ1 Scarna2-201ENSMUST00000157560 414 ntBASIC21.53■■□□□ 1.04
Ndufs4Q9CXZ1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ndufs4Q9CXZ1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ndufs4Q9CXZ1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ndufs4Q9CXZ1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ndufs4Q9CXZ1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ndufs4Q9CXZ1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ndufs4Q9CXZ1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ndufs4Q9CXZ1 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.51■■□□□ 1.03
Ndufs4Q9CXZ1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.51■■□□□ 1.03
Ndufs4Q9CXZ1 Terc-201ENSMUST00000082862 423 ntBASIC21.51■■□□□ 1.03
Ndufs4Q9CXZ1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ndufs4Q9CXZ1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ndufs4Q9CXZ1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndufs4Q9CXZ1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ndufs4Q9CXZ1 Gm9806-201ENSMUST00000051080 552 ntBASIC21.5■■□□□ 1.03
Ndufs4Q9CXZ1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.49■■□□□ 1.03
Ndufs4Q9CXZ1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufs4Q9CXZ1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufs4Q9CXZ1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufs4Q9CXZ1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufs4Q9CXZ1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufs4Q9CXZ1 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufs4Q9CXZ1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Ndufs4Q9CXZ1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufs4Q9CXZ1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufs4Q9CXZ1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms