Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
3110018I06RikQ9CXS0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.32■□□□□ 0.36
3110018I06RikQ9CXS0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
3110018I06RikQ9CXS0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
3110018I06RikQ9CXS0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
3110018I06RikQ9CXS0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3110018I06RikQ9CXS0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
3110018I06RikQ9CXS0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3110018I06RikQ9CXS0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.3■□□□□ 0.36
3110018I06RikQ9CXS0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.3■□□□□ 0.36
3110018I06RikQ9CXS0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
3110018I06RikQ9CXS0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.3■□□□□ 0.36
3110018I06RikQ9CXS0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
3110018I06RikQ9CXS0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
3110018I06RikQ9CXS0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Gm45364-201ENSMUST00000210883 159 ntBASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3110018I06RikQ9CXS0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
3110018I06RikQ9CXS0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
3110018I06RikQ9CXS0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
3110018I06RikQ9CXS0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
3110018I06RikQ9CXS0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
3110018I06RikQ9CXS0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
3110018I06RikQ9CXS0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
3110018I06RikQ9CXS0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
3110018I06RikQ9CXS0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
3110018I06RikQ9CXS0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
3110018I06RikQ9CXS0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.24■□□□□ 0.35
3110018I06RikQ9CXS0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
3110018I06RikQ9CXS0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
3110018I06RikQ9CXS0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
3110018I06RikQ9CXS0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
3110018I06RikQ9CXS0 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
3110018I06RikQ9CXS0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
3110018I06RikQ9CXS0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
3110018I06RikQ9CXS0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.22■□□□□ 0.35
3110018I06RikQ9CXS0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
3110018I06RikQ9CXS0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
3110018I06RikQ9CXS0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
3110018I06RikQ9CXS0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
3110018I06RikQ9CXS0 Gm9812-201ENSMUST00000061934 968 ntBASIC17.21■□□□□ 0.35
3110018I06RikQ9CXS0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
3110018I06RikQ9CXS0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
3110018I06RikQ9CXS0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
3110018I06RikQ9CXS0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
3110018I06RikQ9CXS0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
3110018I06RikQ9CXS0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
3110018I06RikQ9CXS0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
3110018I06RikQ9CXS0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
3110018I06RikQ9CXS0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
3110018I06RikQ9CXS0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
3110018I06RikQ9CXS0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
3110018I06RikQ9CXS0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
3110018I06RikQ9CXS0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
3110018I06RikQ9CXS0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.17■□□□□ 0.34
3110018I06RikQ9CXS0 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.17■□□□□ 0.34
3110018I06RikQ9CXS0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms