Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrc40Q9CRC8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Lrrc40Q9CRC8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lrrc40Q9CRC8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lrrc40Q9CRC8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Lrrc40Q9CRC8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lrrc40Q9CRC8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.55■■□□□ 1.2
Lrrc40Q9CRC8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Lrrc40Q9CRC8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lrrc40Q9CRC8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lrrc40Q9CRC8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Lrrc40Q9CRC8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Lrrc40Q9CRC8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lrrc40Q9CRC8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lrrc40Q9CRC8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lrrc40Q9CRC8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lrrc40Q9CRC8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrrc40Q9CRC8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Lrrc40Q9CRC8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.52■■□□□ 1.2
Lrrc40Q9CRC8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.52■■□□□ 1.2
Lrrc40Q9CRC8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrrc40Q9CRC8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lrrc40Q9CRC8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lrrc40Q9CRC8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrrc40Q9CRC8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrrc40Q9CRC8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrrc40Q9CRC8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.5■■□□□ 1.19
Lrrc40Q9CRC8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.5■■□□□ 1.19
Lrrc40Q9CRC8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Lrrc40Q9CRC8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lrrc40Q9CRC8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lrrc40Q9CRC8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Lrrc40Q9CRC8 Gm7432-201ENSMUST00000210343 879 ntBASIC22.49■■□□□ 1.19
Lrrc40Q9CRC8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lrrc40Q9CRC8 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.49■■□□□ 1.19
Lrrc40Q9CRC8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.48■■□□□ 1.19
Lrrc40Q9CRC8 Gm4799-201ENSMUST00000095396 657 ntBASIC22.48■■□□□ 1.19
Lrrc40Q9CRC8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrrc40Q9CRC8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrrc40Q9CRC8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrrc40Q9CRC8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.47■■□□□ 1.19
Lrrc40Q9CRC8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lrrc40Q9CRC8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Lrrc40Q9CRC8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lrrc40Q9CRC8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Lrrc40Q9CRC8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lrrc40Q9CRC8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lrrc40Q9CRC8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Lrrc40Q9CRC8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrc40Q9CRC8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrc40Q9CRC8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrc40Q9CRC8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrc40Q9CRC8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrc40Q9CRC8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrc40Q9CRC8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrc40Q9CRC8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrc40Q9CRC8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.42■■□□□ 1.18
Lrrc40Q9CRC8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Lrrc40Q9CRC8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrc40Q9CRC8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
Lrrc40Q9CRC8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrc40Q9CRC8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrc40Q9CRC8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrc40Q9CRC8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrc40Q9CRC8 Gm11599-201ENSMUST00000118720 878 ntBASIC22.4■■□□□ 1.18
Lrrc40Q9CRC8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrc40Q9CRC8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrc40Q9CRC8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrc40Q9CRC8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lrrc40Q9CRC8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Lrrc40Q9CRC8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lrrc40Q9CRC8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc40Q9CRC8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc40Q9CRC8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Lrrc40Q9CRC8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrc40Q9CRC8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.38■■□□□ 1.17
Lrrc40Q9CRC8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Lrrc40Q9CRC8 Gm9812-201ENSMUST00000061934 968 ntBASIC22.37■■□□□ 1.17
Lrrc40Q9CRC8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrc40Q9CRC8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 Mir3960-201ENSMUST00000198213 73 ntBASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Lrrc40Q9CRC8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrc40Q9CRC8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms