Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vta1Q9CR26 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Vta1Q9CR26 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Vta1Q9CR26 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.25■■□□□ 1.79
Vta1Q9CR26 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Vta1Q9CR26 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Vta1Q9CR26 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Vta1Q9CR26 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Vta1Q9CR26 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vta1Q9CR26 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Vta1Q9CR26 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.22■■□□□ 1.79
Vta1Q9CR26 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vta1Q9CR26 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.21■■□□□ 1.79
Vta1Q9CR26 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Vta1Q9CR26 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Vta1Q9CR26 Gm5812-201ENSMUST00000061073 957 ntBASIC26.19■■□□□ 1.78
Vta1Q9CR26 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Vta1Q9CR26 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Vta1Q9CR26 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vta1Q9CR26 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vta1Q9CR26 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vta1Q9CR26 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Vta1Q9CR26 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vta1Q9CR26 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Vta1Q9CR26 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vta1Q9CR26 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vta1Q9CR26 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Vta1Q9CR26 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.14■■□□□ 1.78
Vta1Q9CR26 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.14■■□□□ 1.78
Vta1Q9CR26 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
Vta1Q9CR26 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Vta1Q9CR26 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Vta1Q9CR26 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Vta1Q9CR26 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.13■■□□□ 1.77
Vta1Q9CR26 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.12■■□□□ 1.77
Vta1Q9CR26 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Vta1Q9CR26 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
Vta1Q9CR26 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Vta1Q9CR26 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Vta1Q9CR26 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.11■■□□□ 1.77
Vta1Q9CR26 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Vta1Q9CR26 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Vta1Q9CR26 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vta1Q9CR26 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vta1Q9CR26 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Vta1Q9CR26 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Vta1Q9CR26 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Vta1Q9CR26 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vta1Q9CR26 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vta1Q9CR26 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Vta1Q9CR26 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Vta1Q9CR26 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Vta1Q9CR26 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vta1Q9CR26 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.03■■□□□ 1.76
Vta1Q9CR26 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Vta1Q9CR26 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.03■■□□□ 1.76
Vta1Q9CR26 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Vta1Q9CR26 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.03■■□□□ 1.76
Vta1Q9CR26 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Vta1Q9CR26 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Vta1Q9CR26 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Vta1Q9CR26 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Vta1Q9CR26 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Vta1Q9CR26 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Vta1Q9CR26 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Vta1Q9CR26 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Vta1Q9CR26 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26■■□□□ 1.75
Vta1Q9CR26 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.99■■□□□ 1.75
Vta1Q9CR26 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.99■■□□□ 1.75
Vta1Q9CR26 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Vta1Q9CR26 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.98■■□□□ 1.75
Vta1Q9CR26 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Vta1Q9CR26 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.98■■□□□ 1.75
Vta1Q9CR26 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.98■■□□□ 1.75
Vta1Q9CR26 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Vta1Q9CR26 Gm15546-201ENSMUST00000122095 826 ntBASIC25.97■■□□□ 1.75
Vta1Q9CR26 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Vta1Q9CR26 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Vta1Q9CR26 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Vta1Q9CR26 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Vta1Q9CR26 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Vta1Q9CR26 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Vta1Q9CR26 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Vta1Q9CR26 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Vta1Q9CR26 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Vta1Q9CR26 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Vta1Q9CR26 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Vta1Q9CR26 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Vta1Q9CR26 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Vta1Q9CR26 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Vta1Q9CR26 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Vta1Q9CR26 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Vta1Q9CR26 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Vta1Q9CR26 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Vta1Q9CR26 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.91■■□□□ 1.74
Vta1Q9CR26 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Vta1Q9CR26 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Vta1Q9CR26 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Vta1Q9CR26 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Vta1Q9CR26 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms