Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chchd1Q9CQA6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chchd1Q9CQA6 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.29■□□□□ 0.36
Chchd1Q9CQA6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Chchd1Q9CQA6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chchd1Q9CQA6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chchd1Q9CQA6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chchd1Q9CQA6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chchd1Q9CQA6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chchd1Q9CQA6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chchd1Q9CQA6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chchd1Q9CQA6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chchd1Q9CQA6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.26■□□□□ 0.35
Chchd1Q9CQA6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Chchd1Q9CQA6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chchd1Q9CQA6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chchd1Q9CQA6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chchd1Q9CQA6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chchd1Q9CQA6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chchd1Q9CQA6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chchd1Q9CQA6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chchd1Q9CQA6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chchd1Q9CQA6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chchd1Q9CQA6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chchd1Q9CQA6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Gm25238-201ENSMUST00000174914 89 ntBASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chchd1Q9CQA6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chchd1Q9CQA6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chchd1Q9CQA6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.22■□□□□ 0.35
Chchd1Q9CQA6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chchd1Q9CQA6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chchd1Q9CQA6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chchd1Q9CQA6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chchd1Q9CQA6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chchd1Q9CQA6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chchd1Q9CQA6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chchd1Q9CQA6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chchd1Q9CQA6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chchd1Q9CQA6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chchd1Q9CQA6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chchd1Q9CQA6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chchd1Q9CQA6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chchd1Q9CQA6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chchd1Q9CQA6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chchd1Q9CQA6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chchd1Q9CQA6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chchd1Q9CQA6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chchd1Q9CQA6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chchd1Q9CQA6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chchd1Q9CQA6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.18■□□□□ 0.34
Chchd1Q9CQA6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Chchd1Q9CQA6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chchd1Q9CQA6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chchd1Q9CQA6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Chchd1Q9CQA6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chchd1Q9CQA6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chchd1Q9CQA6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.16■□□□□ 0.34
Chchd1Q9CQA6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chchd1Q9CQA6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chchd1Q9CQA6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.14■□□□□ 0.33
Chchd1Q9CQA6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chchd1Q9CQA6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.14■□□□□ 0.33
Chchd1Q9CQA6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chchd1Q9CQA6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.14■□□□□ 0.33
Chchd1Q9CQA6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chchd1Q9CQA6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms