Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.38■□□□□ 0.85
Mrpl54Q9CPW3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrpl54Q9CPW3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.37■□□□□ 0.85
Mrpl54Q9CPW3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Mrpl54Q9CPW3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Mrpl54Q9CPW3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl54Q9CPW3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl54Q9CPW3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl54Q9CPW3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mrpl54Q9CPW3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl54Q9CPW3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
Mrpl54Q9CPW3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl54Q9CPW3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl54Q9CPW3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl54Q9CPW3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl54Q9CPW3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl54Q9CPW3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl54Q9CPW3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl54Q9CPW3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mrpl54Q9CPW3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mrpl54Q9CPW3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.33■□□□□ 0.84
Mrpl54Q9CPW3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mrpl54Q9CPW3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mrpl54Q9CPW3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl54Q9CPW3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl54Q9CPW3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Mrpl54Q9CPW3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl54Q9CPW3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl54Q9CPW3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl54Q9CPW3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl54Q9CPW3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl54Q9CPW3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl54Q9CPW3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl54Q9CPW3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Mrpl54Q9CPW3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl54Q9CPW3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl54Q9CPW3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mrpl54Q9CPW3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.27■□□□□ 0.83
Mrpl54Q9CPW3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl54Q9CPW3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Mrpl54Q9CPW3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl54Q9CPW3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl54Q9CPW3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl54Q9CPW3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl54Q9CPW3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl54Q9CPW3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Mrpl54Q9CPW3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl54Q9CPW3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl54Q9CPW3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl54Q9CPW3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl54Q9CPW3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl54Q9CPW3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl54Q9CPW3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl54Q9CPW3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Mrpl54Q9CPW3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Mrpl54Q9CPW3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl54Q9CPW3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl54Q9CPW3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Mrpl54Q9CPW3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl54Q9CPW3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl54Q9CPW3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl54Q9CPW3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl54Q9CPW3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl54Q9CPW3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mrpl54Q9CPW3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl54Q9CPW3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrpl54Q9CPW3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrpl54Q9CPW3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl54Q9CPW3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl54Q9CPW3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.2■□□□□ 0.82
Mrpl54Q9CPW3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl54Q9CPW3 Gm26115-201ENSMUST00000175605 87 ntBASIC20.2■□□□□ 0.82
Mrpl54Q9CPW3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Mrpl54Q9CPW3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl54Q9CPW3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms