Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc1bQ920F6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Smc1bQ920F6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.06■■□□□ 1.76
Smc1bQ920F6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.06■■□□□ 1.76
Smc1bQ920F6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc1bQ920F6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc1bQ920F6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc1bQ920F6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Smc1bQ920F6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc1bQ920F6 Gm15546-201ENSMUST00000122095 826 ntBASIC26.05■■□□□ 1.76
Smc1bQ920F6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc1bQ920F6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc1bQ920F6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Smc1bQ920F6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc1bQ920F6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc1bQ920F6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Smc1bQ920F6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc1bQ920F6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc1bQ920F6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Smc1bQ920F6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.01■■□□□ 1.75
Smc1bQ920F6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.01■■□□□ 1.75
Smc1bQ920F6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Smc1bQ920F6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26■■□□□ 1.75
Smc1bQ920F6 AC151971.4-201ENSMUST00000214717 704 ntBASIC26■■□□□ 1.75
Smc1bQ920F6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc1bQ920F6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc1bQ920F6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc1bQ920F6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Smc1bQ920F6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smc1bQ920F6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smc1bQ920F6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Smc1bQ920F6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smc1bQ920F6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.99■■□□□ 1.75
Smc1bQ920F6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smc1bQ920F6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.99■■□□□ 1.75
Smc1bQ920F6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Smc1bQ920F6 Gm9812-201ENSMUST00000061934 968 ntBASIC25.98■■□□□ 1.75
Smc1bQ920F6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.98■■□□□ 1.75
Smc1bQ920F6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc1bQ920F6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Smc1bQ920F6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc1bQ920F6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smc1bQ920F6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smc1bQ920F6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smc1bQ920F6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Smc1bQ920F6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.96■■□□□ 1.75
Smc1bQ920F6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Smc1bQ920F6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.96■■□□□ 1.75
Smc1bQ920F6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smc1bQ920F6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.95■■□□□ 1.74
Smc1bQ920F6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.95■■□□□ 1.74
Smc1bQ920F6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Smc1bQ920F6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Smc1bQ920F6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc1bQ920F6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.93■■□□□ 1.74
Smc1bQ920F6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc1bQ920F6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Smc1bQ920F6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc1bQ920F6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smc1bQ920F6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Smc1bQ920F6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Smc1bQ920F6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Smc1bQ920F6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Smc1bQ920F6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Smc1bQ920F6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Smc1bQ920F6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Smc1bQ920F6 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.89■■□□□ 1.74
Smc1bQ920F6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Smc1bQ920F6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Smc1bQ920F6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Smc1bQ920F6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Smc1bQ920F6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Smc1bQ920F6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.88■■□□□ 1.73
Smc1bQ920F6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Smc1bQ920F6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Smc1bQ920F6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Smc1bQ920F6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc1bQ920F6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Smc1bQ920F6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smc1bQ920F6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Smc1bQ920F6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smc1bQ920F6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smc1bQ920F6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.84■■□□□ 1.73
Smc1bQ920F6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.84■■□□□ 1.73
Smc1bQ920F6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Smc1bQ920F6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Smc1bQ920F6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.73
Smc1bQ920F6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Smc1bQ920F6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Smc1bQ920F6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Smc1bQ920F6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Smc1bQ920F6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
Smc1bQ920F6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smc1bQ920F6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Smc1bQ920F6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Smc1bQ920F6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
Smc1bQ920F6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smc1bQ920F6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smc1bQ920F6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Smc1bQ920F6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms