Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb1Q91Y08 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb1Q91Y08 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb1Q91Y08 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb1Q91Y08 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb1Q91Y08 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb1Q91Y08 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
Pcdhb1Q91Y08 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb1Q91Y08 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pcdhb1Q91Y08 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb1Q91Y08 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Pcdhb1Q91Y08 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb1Q91Y08 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb1Q91Y08 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb1Q91Y08 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb1Q91Y08 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb1Q91Y08 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb1Q91Y08 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb1Q91Y08 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdhb1Q91Y08 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 Mir3960-201ENSMUST00000198213 73 ntBASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb1Q91Y08 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb1Q91Y08 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb1Q91Y08 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.61■■□□□ 1.37
Pcdhb1Q91Y08 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb1Q91Y08 Gm9812-201ENSMUST00000061934 968 ntBASIC23.6■■□□□ 1.37
Pcdhb1Q91Y08 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb1Q91Y08 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb1Q91Y08 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb1Q91Y08 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Pcdhb1Q91Y08 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Pcdhb1Q91Y08 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.37
Pcdhb1Q91Y08 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Pcdhb1Q91Y08 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb1Q91Y08 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.58■■□□□ 1.37
Pcdhb1Q91Y08 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.57■■□□□ 1.36
Pcdhb1Q91Y08 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb1Q91Y08 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Pcdhb1Q91Y08 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb1Q91Y08 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.55■■□□□ 1.36
Pcdhb1Q91Y08 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.55■■□□□ 1.36
Pcdhb1Q91Y08 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb1Q91Y08 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Gm45364-201ENSMUST00000210883 159 ntBASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb1Q91Y08 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb1Q91Y08 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.52■■□□□ 1.36
Pcdhb1Q91Y08 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb1Q91Y08 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.51■■□□□ 1.35
Pcdhb1Q91Y08 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.51■■□□□ 1.35
Pcdhb1Q91Y08 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Pcdhb1Q91Y08 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb1Q91Y08 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb1Q91Y08 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb1Q91Y08 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb1Q91Y08 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb1Q91Y08 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb1Q91Y08 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb1Q91Y08 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb1Q91Y08 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb1Q91Y08 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb1Q91Y08 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb1Q91Y08 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb1Q91Y08 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdhb1Q91Y08 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb1Q91Y08 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb1Q91Y08 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb1Q91Y08 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhb1Q91Y08 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.45■■□□□ 1.34
Pcdhb1Q91Y08 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb1Q91Y08 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb1Q91Y08 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms