Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb21Q91V48 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb21Q91V48 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.4■■□□□ 1.18
Pcdhb21Q91V48 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb21Q91V48 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb21Q91V48 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb21Q91V48 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb21Q91V48 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Pcdhb21Q91V48 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhb21Q91V48 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb21Q91V48 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb21Q91V48 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb21Q91V48 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb21Q91V48 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb21Q91V48 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb21Q91V48 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb21Q91V48 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb21Q91V48 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.37■■□□□ 1.17
Pcdhb21Q91V48 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb21Q91V48 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb21Q91V48 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.35■■□□□ 1.17
Pcdhb21Q91V48 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Pcdhb21Q91V48 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb21Q91V48 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb21Q91V48 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb21Q91V48 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb21Q91V48 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb21Q91V48 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhb21Q91V48 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb21Q91V48 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb21Q91V48 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb21Q91V48 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb21Q91V48 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb21Q91V48 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.32■■□□□ 1.16
Pcdhb21Q91V48 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb21Q91V48 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb21Q91V48 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdhb21Q91V48 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb21Q91V48 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb21Q91V48 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pcdhb21Q91V48 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb21Q91V48 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb21Q91V48 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb21Q91V48 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb21Q91V48 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb21Q91V48 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb21Q91V48 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb21Q91V48 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Pcdhb21Q91V48 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcdhb21Q91V48 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb21Q91V48 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb21Q91V48 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb21Q91V48 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb21Q91V48 Terc-201ENSMUST00000082862 423 ntBASIC22.27■■□□□ 1.16
Pcdhb21Q91V48 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb21Q91V48 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhb21Q91V48 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdhb21Q91V48 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb21Q91V48 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb21Q91V48 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.26■■□□□ 1.15
Pcdhb21Q91V48 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb21Q91V48 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb21Q91V48 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb21Q91V48 Gm9806-201ENSMUST00000051080 552 ntBASIC22.25■■□□□ 1.15
Pcdhb21Q91V48 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb21Q91V48 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhb21Q91V48 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb21Q91V48 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb21Q91V48 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Gm11687-201ENSMUST00000118911 886 ntBASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Scarna2-201ENSMUST00000157560 414 ntBASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb21Q91V48 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb21Q91V48 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb21Q91V48 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb21Q91V48 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb21Q91V48 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhb21Q91V48 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb21Q91V48 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb21Q91V48 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdhb21Q91V48 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb21Q91V48 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb21Q91V48 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdhb21Q91V48 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhb21Q91V48 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhb21Q91V48 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pcdhb21Q91V48 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms