Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf130Q8VEM1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf130Q8VEM1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf130Q8VEM1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf130Q8VEM1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf130Q8VEM1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf130Q8VEM1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.33■■□□□ 1.01
Rnf130Q8VEM1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rnf130Q8VEM1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf130Q8VEM1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rnf130Q8VEM1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf130Q8VEM1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf130Q8VEM1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf130Q8VEM1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf130Q8VEM1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf130Q8VEM1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf130Q8VEM1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf130Q8VEM1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.31■■□□□ 1
Rnf130Q8VEM1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf130Q8VEM1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rnf130Q8VEM1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf130Q8VEM1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.3■■□□□ 1
Rnf130Q8VEM1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf130Q8VEM1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf130Q8VEM1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf130Q8VEM1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf130Q8VEM1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.28■■□□□ 1
Rnf130Q8VEM1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf130Q8VEM1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf130Q8VEM1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf130Q8VEM1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf130Q8VEM1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.27■■□□□ 1
Rnf130Q8VEM1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf130Q8VEM1 Gm8503-201ENSMUST00000118131 455 ntBASIC21.25■□□□□ 0.99
Rnf130Q8VEM1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf130Q8VEM1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf130Q8VEM1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf130Q8VEM1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf130Q8VEM1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.25■□□□□ 0.99
Rnf130Q8VEM1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf130Q8VEM1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf130Q8VEM1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf130Q8VEM1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf130Q8VEM1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf130Q8VEM1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf130Q8VEM1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf130Q8VEM1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rnf130Q8VEM1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf130Q8VEM1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rnf130Q8VEM1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf130Q8VEM1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf130Q8VEM1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf130Q8VEM1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.21■□□□□ 0.99
Rnf130Q8VEM1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf130Q8VEM1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.21■□□□□ 0.99
Rnf130Q8VEM1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Rnf130Q8VEM1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf130Q8VEM1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rnf130Q8VEM1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf130Q8VEM1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.2■□□□□ 0.98
Rnf130Q8VEM1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rnf130Q8VEM1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf130Q8VEM1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.18■□□□□ 0.98
Rnf130Q8VEM1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf130Q8VEM1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf130Q8VEM1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.17■□□□□ 0.98
Rnf130Q8VEM1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf130Q8VEM1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf130Q8VEM1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf130Q8VEM1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rnf130Q8VEM1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf130Q8VEM1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms