Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ndc1Q8VCB1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndc1Q8VCB1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndc1Q8VCB1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndc1Q8VCB1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndc1Q8VCB1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.38■■□□□ 1.01
Ndc1Q8VCB1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndc1Q8VCB1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndc1Q8VCB1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ndc1Q8VCB1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndc1Q8VCB1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.37■■□□□ 1.01
Ndc1Q8VCB1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.37■■□□□ 1.01
Ndc1Q8VCB1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndc1Q8VCB1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ndc1Q8VCB1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ndc1Q8VCB1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ndc1Q8VCB1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndc1Q8VCB1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ndc1Q8VCB1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ndc1Q8VCB1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndc1Q8VCB1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ndc1Q8VCB1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ndc1Q8VCB1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Ndc1Q8VCB1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndc1Q8VCB1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Ndc1Q8VCB1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndc1Q8VCB1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndc1Q8VCB1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndc1Q8VCB1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ndc1Q8VCB1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndc1Q8VCB1 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.33■■□□□ 1.01
Ndc1Q8VCB1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndc1Q8VCB1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ndc1Q8VCB1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ndc1Q8VCB1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ndc1Q8VCB1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Ndc1Q8VCB1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ndc1Q8VCB1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc1Q8VCB1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc1Q8VCB1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc1Q8VCB1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ndc1Q8VCB1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ndc1Q8VCB1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.31■■□□□ 1
Ndc1Q8VCB1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ndc1Q8VCB1 Terc-201ENSMUST00000082862 423 ntBASIC21.31■■□□□ 1
Ndc1Q8VCB1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc1Q8VCB1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc1Q8VCB1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc1Q8VCB1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.3■■□□□ 1
Ndc1Q8VCB1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.3■■□□□ 1
Ndc1Q8VCB1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.3■■□□□ 1
Ndc1Q8VCB1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ndc1Q8VCB1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc1Q8VCB1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ndc1Q8VCB1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ndc1Q8VCB1 Gm7332-201ENSMUST00000118351 454 ntBASIC21.29■■□□□ 1
Ndc1Q8VCB1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ndc1Q8VCB1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ndc1Q8VCB1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ndc1Q8VCB1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndc1Q8VCB1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndc1Q8VCB1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndc1Q8VCB1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Ndc1Q8VCB1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndc1Q8VCB1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
Ndc1Q8VCB1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Gm14523-201ENSMUST00000117260 558 ntBASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc1Q8VCB1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc1Q8VCB1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc1Q8VCB1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc1Q8VCB1 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.25■□□□□ 0.99
Ndc1Q8VCB1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc1Q8VCB1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ndc1Q8VCB1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ndc1Q8VCB1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ndc1Q8VCB1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndc1Q8VCB1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.22■□□□□ 0.99
Ndc1Q8VCB1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.22■□□□□ 0.99
Ndc1Q8VCB1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndc1Q8VCB1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc1Q8VCB1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc1Q8VCB1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ndc1Q8VCB1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.2■□□□□ 0.98
Ndc1Q8VCB1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms