Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf8Q8VC56 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf8Q8VC56 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf8Q8VC56 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf8Q8VC56 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.7■■□□□ 1.06
Rnf8Q8VC56 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Rnf8Q8VC56 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf8Q8VC56 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Rnf8Q8VC56 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
Rnf8Q8VC56 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.68■■□□□ 1.06
Rnf8Q8VC56 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf8Q8VC56 Particl-201ENSMUST00000205370 1560 ntBASIC21.67■■□□□ 1.06
Rnf8Q8VC56 Gm11599-201ENSMUST00000118720 878 ntBASIC21.67■■□□□ 1.06
Rnf8Q8VC56 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.67■■□□□ 1.06
Rnf8Q8VC56 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf8Q8VC56 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf8Q8VC56 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Rnf8Q8VC56 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.65■■□□□ 1.06
Rnf8Q8VC56 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf8Q8VC56 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf8Q8VC56 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf8Q8VC56 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf8Q8VC56 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Rnf8Q8VC56 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf8Q8VC56 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf8Q8VC56 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.64■■□□□ 1.05
Rnf8Q8VC56 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rnf8Q8VC56 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf8Q8VC56 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf8Q8VC56 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf8Q8VC56 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.63■■□□□ 1.05
Rnf8Q8VC56 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf8Q8VC56 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf8Q8VC56 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.63■■□□□ 1.05
Rnf8Q8VC56 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf8Q8VC56 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf8Q8VC56 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf8Q8VC56 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.62■■□□□ 1.05
Rnf8Q8VC56 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.62■■□□□ 1.05
Rnf8Q8VC56 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf8Q8VC56 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Rnf8Q8VC56 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf8Q8VC56 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf8Q8VC56 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rnf8Q8VC56 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf8Q8VC56 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf8Q8VC56 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf8Q8VC56 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rnf8Q8VC56 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf8Q8VC56 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf8Q8VC56 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf8Q8VC56 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf8Q8VC56 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf8Q8VC56 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf8Q8VC56 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Rnf8Q8VC56 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rnf8Q8VC56 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf8Q8VC56 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf8Q8VC56 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Rnf8Q8VC56 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.57■■□□□ 1.04
Rnf8Q8VC56 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
Rnf8Q8VC56 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf8Q8VC56 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf8Q8VC56 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf8Q8VC56 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf8Q8VC56 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf8Q8VC56 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.55■■□□□ 1.04
Rnf8Q8VC56 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf8Q8VC56 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf8Q8VC56 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf8Q8VC56 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf8Q8VC56 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf8Q8VC56 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf8Q8VC56 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rnf8Q8VC56 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf8Q8VC56 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf8Q8VC56 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf8Q8VC56 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf8Q8VC56 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf8Q8VC56 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf8Q8VC56 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf8Q8VC56 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf8Q8VC56 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf8Q8VC56 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf8Q8VC56 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf8Q8VC56 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf8Q8VC56 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf8Q8VC56 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf8Q8VC56 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf8Q8VC56 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf8Q8VC56 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rnf8Q8VC56 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf8Q8VC56 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 139.4 ms