Protein–RNA interactions for Protein: Q8K1S1

Lgi4, Leucine-rich repeat LGI family member 4, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi4Q8K1S1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Lgi4Q8K1S1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lgi4Q8K1S1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Lgi4Q8K1S1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.48■■□□□ 1.19
Lgi4Q8K1S1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lgi4Q8K1S1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lgi4Q8K1S1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.47■■□□□ 1.19
Lgi4Q8K1S1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.47■■□□□ 1.19
Lgi4Q8K1S1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lgi4Q8K1S1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.46■■□□□ 1.19
Lgi4Q8K1S1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lgi4Q8K1S1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.46■■□□□ 1.19
Lgi4Q8K1S1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lgi4Q8K1S1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lgi4Q8K1S1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Lgi4Q8K1S1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lgi4Q8K1S1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Lgi4Q8K1S1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Lgi4Q8K1S1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lgi4Q8K1S1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lgi4Q8K1S1 Rps24-207ENSMUST00000224568 714 ntBASIC22.43■■□□□ 1.18
Lgi4Q8K1S1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lgi4Q8K1S1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lgi4Q8K1S1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.42■■□□□ 1.18
Lgi4Q8K1S1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Lgi4Q8K1S1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lgi4Q8K1S1 Terc-201ENSMUST00000082862 423 ntBASIC22.42■■□□□ 1.18
Lgi4Q8K1S1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Lgi4Q8K1S1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lgi4Q8K1S1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lgi4Q8K1S1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lgi4Q8K1S1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Lgi4Q8K1S1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lgi4Q8K1S1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Lgi4Q8K1S1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Lgi4Q8K1S1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Lgi4Q8K1S1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Lgi4Q8K1S1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lgi4Q8K1S1 Gm15820-201ENSMUST00000201566 728 ntBASIC22.37■■□□□ 1.17
Lgi4Q8K1S1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.37■■□□□ 1.17
Lgi4Q8K1S1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.37■■□□□ 1.17
Lgi4Q8K1S1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lgi4Q8K1S1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Lgi4Q8K1S1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lgi4Q8K1S1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Lgi4Q8K1S1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Lgi4Q8K1S1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.35■■□□□ 1.17
Lgi4Q8K1S1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lgi4Q8K1S1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lgi4Q8K1S1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.34■■□□□ 1.17
Lgi4Q8K1S1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Lgi4Q8K1S1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lgi4Q8K1S1 Gm45102-201ENSMUST00000207427 857 ntBASIC22.33■■□□□ 1.17
Lgi4Q8K1S1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lgi4Q8K1S1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Lgi4Q8K1S1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Lgi4Q8K1S1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Lgi4Q8K1S1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lgi4Q8K1S1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lgi4Q8K1S1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lgi4Q8K1S1 Gm13238-201ENSMUST00000117655 780 ntBASIC22.31■■□□□ 1.16
Lgi4Q8K1S1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lgi4Q8K1S1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lgi4Q8K1S1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lgi4Q8K1S1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.29■■□□□ 1.16
Lgi4Q8K1S1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lgi4Q8K1S1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lgi4Q8K1S1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Lgi4Q8K1S1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lgi4Q8K1S1 Gm43566-201ENSMUST00000196851 808 ntBASIC22.28■■□□□ 1.16
Lgi4Q8K1S1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lgi4Q8K1S1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.28■■□□□ 1.16
Lgi4Q8K1S1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Lgi4Q8K1S1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lgi4Q8K1S1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lgi4Q8K1S1 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.27■■□□□ 1.16
Lgi4Q8K1S1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lgi4Q8K1S1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 Gm14117-201ENSMUST00000122417 843 ntBASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 Gm44428-201ENSMUST00000204474 874 ntBASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lgi4Q8K1S1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lgi4Q8K1S1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Lgi4Q8K1S1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.25■■□□□ 1.15
Lgi4Q8K1S1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms