Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.38■■□□□ 1.81
Syne4Q8CII8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Syne4Q8CII8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Syne4Q8CII8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Syne4Q8CII8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.37■■□□□ 1.81
Syne4Q8CII8 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.37■■□□□ 1.81
Syne4Q8CII8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Syne4Q8CII8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Syne4Q8CII8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Syne4Q8CII8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Syne4Q8CII8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Syne4Q8CII8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Syne4Q8CII8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Syne4Q8CII8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Syne4Q8CII8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Syne4Q8CII8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Syne4Q8CII8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
Syne4Q8CII8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Syne4Q8CII8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Syne4Q8CII8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.31■■□□□ 1.8
Syne4Q8CII8 Gm15820-201ENSMUST00000201566 728 ntBASIC26.3■■□□□ 1.8
Syne4Q8CII8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Syne4Q8CII8 Gm13238-201ENSMUST00000117655 780 ntBASIC26.29■■□□□ 1.8
Syne4Q8CII8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Syne4Q8CII8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Syne4Q8CII8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Syne4Q8CII8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Syne4Q8CII8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Syne4Q8CII8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Syne4Q8CII8 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.27■■□□□ 1.8
Syne4Q8CII8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Syne4Q8CII8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.27■■□□□ 1.8
Syne4Q8CII8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Syne4Q8CII8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Syne4Q8CII8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Syne4Q8CII8 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.26■■□□□ 1.79
Syne4Q8CII8 Rps24-207ENSMUST00000224568 714 ntBASIC26.26■■□□□ 1.79
Syne4Q8CII8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Syne4Q8CII8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.25■■□□□ 1.79
Syne4Q8CII8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Syne4Q8CII8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Syne4Q8CII8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Syne4Q8CII8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Syne4Q8CII8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Syne4Q8CII8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Syne4Q8CII8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.23■■□□□ 1.79
Syne4Q8CII8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Syne4Q8CII8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Syne4Q8CII8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Syne4Q8CII8 Gm43566-201ENSMUST00000196851 808 ntBASIC26.22■■□□□ 1.79
Syne4Q8CII8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Syne4Q8CII8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Syne4Q8CII8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
Syne4Q8CII8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.21■■□□□ 1.79
Syne4Q8CII8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.2■■□□□ 1.78
Syne4Q8CII8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.2■■□□□ 1.78
Syne4Q8CII8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Syne4Q8CII8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Syne4Q8CII8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Syne4Q8CII8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Syne4Q8CII8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Syne4Q8CII8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Syne4Q8CII8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Syne4Q8CII8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.17■■□□□ 1.78
Syne4Q8CII8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Syne4Q8CII8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Syne4Q8CII8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.16■■□□□ 1.78
Syne4Q8CII8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.16■■□□□ 1.78
Syne4Q8CII8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.15■■□□□ 1.78
Syne4Q8CII8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Syne4Q8CII8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.15■■□□□ 1.78
Syne4Q8CII8 Gm45444-201ENSMUST00000211394 898 ntBASIC26.15■■□□□ 1.78
Syne4Q8CII8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Syne4Q8CII8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Syne4Q8CII8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.12■■□□□ 1.77
Syne4Q8CII8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Syne4Q8CII8 Gm45102-201ENSMUST00000207427 857 ntBASIC26.12■■□□□ 1.77
Syne4Q8CII8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Syne4Q8CII8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Syne4Q8CII8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Syne4Q8CII8 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.11■■□□□ 1.77
Syne4Q8CII8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.11■■□□□ 1.77
Syne4Q8CII8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Syne4Q8CII8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Syne4Q8CII8 Gm14117-201ENSMUST00000122417 843 ntBASIC26.1■■□□□ 1.77
Syne4Q8CII8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Syne4Q8CII8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Syne4Q8CII8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Syne4Q8CII8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Syne4Q8CII8 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.08■■□□□ 1.77
Syne4Q8CII8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
Syne4Q8CII8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.08■■□□□ 1.77
Syne4Q8CII8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Syne4Q8CII8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Syne4Q8CII8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.07■■□□□ 1.76
Syne4Q8CII8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Syne4Q8CII8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Syne4Q8CII8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Syne4Q8CII8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Syne4Q8CII8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms