Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Clip4Q8CI96 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Clip4Q8CI96 Gm37136-201ENSMUST00000194368 194 ntBASIC22.67■■□□□ 1.22
Clip4Q8CI96 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Clip4Q8CI96 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Clip4Q8CI96 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Clip4Q8CI96 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clip4Q8CI96 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clip4Q8CI96 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Clip4Q8CI96 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Clip4Q8CI96 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.65■■□□□ 1.22
Clip4Q8CI96 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Clip4Q8CI96 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Clip4Q8CI96 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Clip4Q8CI96 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Clip4Q8CI96 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.64■■□□□ 1.21
Clip4Q8CI96 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Clip4Q8CI96 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Clip4Q8CI96 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clip4Q8CI96 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clip4Q8CI96 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.61■■□□□ 1.21
Clip4Q8CI96 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clip4Q8CI96 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Clip4Q8CI96 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Clip4Q8CI96 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Clip4Q8CI96 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Clip4Q8CI96 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Clip4Q8CI96 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clip4Q8CI96 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clip4Q8CI96 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clip4Q8CI96 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clip4Q8CI96 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clip4Q8CI96 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Clip4Q8CI96 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.58■■□□□ 1.21
Clip4Q8CI96 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Clip4Q8CI96 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Clip4Q8CI96 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Clip4Q8CI96 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Clip4Q8CI96 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Clip4Q8CI96 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Clip4Q8CI96 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.57■■□□□ 1.2
Clip4Q8CI96 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clip4Q8CI96 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Clip4Q8CI96 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clip4Q8CI96 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clip4Q8CI96 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Clip4Q8CI96 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Clip4Q8CI96 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Clip4Q8CI96 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.55■■□□□ 1.2
Clip4Q8CI96 Gm6311-201ENSMUST00000073790 878 ntBASIC22.55■■□□□ 1.2
Clip4Q8CI96 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Clip4Q8CI96 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Clip4Q8CI96 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Clip4Q8CI96 Gm4799-201ENSMUST00000095396 657 ntBASIC22.54■■□□□ 1.2
Clip4Q8CI96 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Clip4Q8CI96 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.54■■□□□ 1.2
Clip4Q8CI96 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.54■■□□□ 1.2
Clip4Q8CI96 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.54■■□□□ 1.2
Clip4Q8CI96 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clip4Q8CI96 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clip4Q8CI96 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clip4Q8CI96 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clip4Q8CI96 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clip4Q8CI96 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Clip4Q8CI96 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clip4Q8CI96 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clip4Q8CI96 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.5■■□□□ 1.19
Clip4Q8CI96 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Clip4Q8CI96 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.5■■□□□ 1.19
Clip4Q8CI96 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Clip4Q8CI96 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clip4Q8CI96 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clip4Q8CI96 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clip4Q8CI96 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Clip4Q8CI96 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Clip4Q8CI96 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.48■■□□□ 1.19
Clip4Q8CI96 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms