Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rdh1Q8CGV4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Gm14523-201ENSMUST00000117260 558 ntBASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rdh1Q8CGV4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rdh1Q8CGV4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rdh1Q8CGV4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rdh1Q8CGV4 Gm7332-201ENSMUST00000118351 454 ntBASIC22.26■■□□□ 1.15
Rdh1Q8CGV4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rdh1Q8CGV4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rdh1Q8CGV4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rdh1Q8CGV4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rdh1Q8CGV4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rdh1Q8CGV4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rdh1Q8CGV4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Rdh1Q8CGV4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rdh1Q8CGV4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rdh1Q8CGV4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.23■■□□□ 1.15
Rdh1Q8CGV4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rdh1Q8CGV4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rdh1Q8CGV4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rdh1Q8CGV4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rdh1Q8CGV4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
Rdh1Q8CGV4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rdh1Q8CGV4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rdh1Q8CGV4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rdh1Q8CGV4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rdh1Q8CGV4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rdh1Q8CGV4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rdh1Q8CGV4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rdh1Q8CGV4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Rdh1Q8CGV4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.17■■□□□ 1.14
Rdh1Q8CGV4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rdh1Q8CGV4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rdh1Q8CGV4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.17■■□□□ 1.14
Rdh1Q8CGV4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rdh1Q8CGV4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rdh1Q8CGV4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rdh1Q8CGV4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Rdh1Q8CGV4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.15■■□□□ 1.14
Rdh1Q8CGV4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rdh1Q8CGV4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rdh1Q8CGV4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Rdh1Q8CGV4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Rdh1Q8CGV4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.14■■□□□ 1.13
Rdh1Q8CGV4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rdh1Q8CGV4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Rdh1Q8CGV4 Gm44428-201ENSMUST00000204474 874 ntBASIC22.13■■□□□ 1.13
Rdh1Q8CGV4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rdh1Q8CGV4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rdh1Q8CGV4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.12■■□□□ 1.13
Rdh1Q8CGV4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rdh1Q8CGV4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rdh1Q8CGV4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rdh1Q8CGV4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rdh1Q8CGV4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rdh1Q8CGV4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rdh1Q8CGV4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rdh1Q8CGV4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.09■■□□□ 1.13
Rdh1Q8CGV4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rdh1Q8CGV4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rdh1Q8CGV4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rdh1Q8CGV4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rdh1Q8CGV4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rdh1Q8CGV4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh1Q8CGV4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh1Q8CGV4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rdh1Q8CGV4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rdh1Q8CGV4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rdh1Q8CGV4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh1Q8CGV4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh1Q8CGV4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rdh1Q8CGV4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms