Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShfQ8CG80 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShfQ8CG80 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShfQ8CG80 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ShfQ8CG80 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ShfQ8CG80 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ShfQ8CG80 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ShfQ8CG80 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShfQ8CG80 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShfQ8CG80 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.26■□□□□ 0.83
ShfQ8CG80 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ShfQ8CG80 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShfQ8CG80 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
ShfQ8CG80 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ShfQ8CG80 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.25■□□□□ 0.83
ShfQ8CG80 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ShfQ8CG80 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.25■□□□□ 0.83
ShfQ8CG80 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShfQ8CG80 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShfQ8CG80 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShfQ8CG80 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShfQ8CG80 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShfQ8CG80 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShfQ8CG80 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.23■□□□□ 0.83
ShfQ8CG80 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShfQ8CG80 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShfQ8CG80 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShfQ8CG80 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShfQ8CG80 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ShfQ8CG80 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.21■□□□□ 0.83
ShfQ8CG80 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShfQ8CG80 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ShfQ8CG80 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShfQ8CG80 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShfQ8CG80 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShfQ8CG80 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShfQ8CG80 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShfQ8CG80 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShfQ8CG80 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.19■□□□□ 0.82
ShfQ8CG80 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.19■□□□□ 0.82
ShfQ8CG80 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShfQ8CG80 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShfQ8CG80 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ShfQ8CG80 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ShfQ8CG80 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ShfQ8CG80 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.17■□□□□ 0.82
ShfQ8CG80 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShfQ8CG80 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShfQ8CG80 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
ShfQ8CG80 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShfQ8CG80 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShfQ8CG80 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShfQ8CG80 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShfQ8CG80 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShfQ8CG80 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ShfQ8CG80 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
ShfQ8CG80 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ShfQ8CG80 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShfQ8CG80 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShfQ8CG80 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ShfQ8CG80 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShfQ8CG80 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.13■□□□□ 0.81
ShfQ8CG80 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.13■□□□□ 0.81
ShfQ8CG80 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShfQ8CG80 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShfQ8CG80 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShfQ8CG80 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.12■□□□□ 0.81
ShfQ8CG80 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShfQ8CG80 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ShfQ8CG80 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShfQ8CG80 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShfQ8CG80 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ShfQ8CG80 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ShfQ8CG80 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ShfQ8CG80 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.1■□□□□ 0.81
ShfQ8CG80 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ShfQ8CG80 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ShfQ8CG80 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ShfQ8CG80 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.09■□□□□ 0.81
ShfQ8CG80 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShfQ8CG80 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShfQ8CG80 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ShfQ8CG80 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ShfQ8CG80 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ShfQ8CG80 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ShfQ8CG80 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms