Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.16■■□□□ 1.94
Nek11Q8C0Q4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Nek11Q8C0Q4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Nek11Q8C0Q4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Nek11Q8C0Q4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Nek11Q8C0Q4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Nek11Q8C0Q4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Nek11Q8C0Q4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
Nek11Q8C0Q4 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.14■■□□□ 1.94
Nek11Q8C0Q4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Nek11Q8C0Q4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Nek11Q8C0Q4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Nek11Q8C0Q4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Nek11Q8C0Q4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Nek11Q8C0Q4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Nek11Q8C0Q4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Nek11Q8C0Q4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.11■■□□□ 1.93
Nek11Q8C0Q4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Nek11Q8C0Q4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nek11Q8C0Q4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Nek11Q8C0Q4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.09■■□□□ 1.93
Nek11Q8C0Q4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Nek11Q8C0Q4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Nek11Q8C0Q4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Nek11Q8C0Q4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.07■■□□□ 1.92
Nek11Q8C0Q4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Nek11Q8C0Q4 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.07■■□□□ 1.92
Nek11Q8C0Q4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.06■■□□□ 1.92
Nek11Q8C0Q4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.06■■□□□ 1.92
Nek11Q8C0Q4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Nek11Q8C0Q4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Nek11Q8C0Q4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Nek11Q8C0Q4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Nek11Q8C0Q4 Terc-201ENSMUST00000082862 423 ntBASIC27.04■■□□□ 1.92
Nek11Q8C0Q4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Nek11Q8C0Q4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.03■■□□□ 1.92
Nek11Q8C0Q4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Nek11Q8C0Q4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Nek11Q8C0Q4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Nek11Q8C0Q4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Nek11Q8C0Q4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Nek11Q8C0Q4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Nek11Q8C0Q4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Nek11Q8C0Q4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Nek11Q8C0Q4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27■■□□□ 1.91
Nek11Q8C0Q4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27■■□□□ 1.91
Nek11Q8C0Q4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Nek11Q8C0Q4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Nek11Q8C0Q4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Nek11Q8C0Q4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.99■■□□□ 1.91
Nek11Q8C0Q4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
Nek11Q8C0Q4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Nek11Q8C0Q4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Nek11Q8C0Q4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Nek11Q8C0Q4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Nek11Q8C0Q4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
Nek11Q8C0Q4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Nek11Q8C0Q4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Nek11Q8C0Q4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Nek11Q8C0Q4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Nek11Q8C0Q4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Nek11Q8C0Q4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Nek11Q8C0Q4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Nek11Q8C0Q4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Nek11Q8C0Q4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Nek11Q8C0Q4 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.94■■□□□ 1.9
Nek11Q8C0Q4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Nek11Q8C0Q4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nek11Q8C0Q4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nek11Q8C0Q4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Nek11Q8C0Q4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nek11Q8C0Q4 Scarna2-201ENSMUST00000157560 414 ntBASIC26.92■■□□□ 1.9
Nek11Q8C0Q4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.92■■□□□ 1.9
Nek11Q8C0Q4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Nek11Q8C0Q4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Nek11Q8C0Q4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.91■■□□□ 1.9
Nek11Q8C0Q4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Nek11Q8C0Q4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Nek11Q8C0Q4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Nek11Q8C0Q4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Nek11Q8C0Q4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Nek11Q8C0Q4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Nek11Q8C0Q4 Gm9806-201ENSMUST00000051080 552 ntBASIC26.89■■□□□ 1.9
Nek11Q8C0Q4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Nek11Q8C0Q4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Nek11Q8C0Q4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 248.6 ms