Protein–RNA interactions for Protein: Q8BYY4

Ttc39b, Tetratricopeptide repeat protein 39B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39bQ8BYY4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.6■■□□□ 1.53
Ttc39bQ8BYY4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ttc39bQ8BYY4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ttc39bQ8BYY4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ttc39bQ8BYY4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Ttc39bQ8BYY4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ttc39bQ8BYY4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ttc39bQ8BYY4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ttc39bQ8BYY4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ttc39bQ8BYY4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Ttc39bQ8BYY4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.57■■□□□ 1.52
Ttc39bQ8BYY4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.56■■□□□ 1.52
Ttc39bQ8BYY4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.56■■□□□ 1.52
Ttc39bQ8BYY4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.56■■□□□ 1.52
Ttc39bQ8BYY4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ttc39bQ8BYY4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.55■■□□□ 1.52
Ttc39bQ8BYY4 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.55■■□□□ 1.52
Ttc39bQ8BYY4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc39bQ8BYY4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ttc39bQ8BYY4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc39bQ8BYY4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ttc39bQ8BYY4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ttc39bQ8BYY4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ttc39bQ8BYY4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ttc39bQ8BYY4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc39bQ8BYY4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc39bQ8BYY4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc39bQ8BYY4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc39bQ8BYY4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.52■■□□□ 1.52
Ttc39bQ8BYY4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc39bQ8BYY4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc39bQ8BYY4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.51■■□□□ 1.51
Ttc39bQ8BYY4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc39bQ8BYY4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.51■■□□□ 1.51
Ttc39bQ8BYY4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc39bQ8BYY4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc39bQ8BYY4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc39bQ8BYY4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc39bQ8BYY4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc39bQ8BYY4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc39bQ8BYY4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc39bQ8BYY4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc39bQ8BYY4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 Gm44428-201ENSMUST00000204474 874 ntBASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.48■■□□□ 1.51
Ttc39bQ8BYY4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ttc39bQ8BYY4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.47■■□□□ 1.51
Ttc39bQ8BYY4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ttc39bQ8BYY4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Ttc39bQ8BYY4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ttc39bQ8BYY4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Ttc39bQ8BYY4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.45■■□□□ 1.5
Ttc39bQ8BYY4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc39bQ8BYY4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc39bQ8BYY4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc39bQ8BYY4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc39bQ8BYY4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc39bQ8BYY4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc39bQ8BYY4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc39bQ8BYY4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc39bQ8BYY4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc39bQ8BYY4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ttc39bQ8BYY4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ttc39bQ8BYY4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ttc39bQ8BYY4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ttc39bQ8BYY4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ttc39bQ8BYY4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Ttc39bQ8BYY4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Gm10420-201ENSMUST00000121713 882 ntBASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.4■■□□□ 1.5
Ttc39bQ8BYY4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ttc39bQ8BYY4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.38■■□□□ 1.49
Ttc39bQ8BYY4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc39bQ8BYY4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ttc39bQ8BYY4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ttc39bQ8BYY4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.37■■□□□ 1.49
Ttc39bQ8BYY4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc39bQ8BYY4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Ttc39bQ8BYY4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Ttc39bQ8BYY4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc39bQ8BYY4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc39bQ8BYY4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc39bQ8BYY4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Ttc39bQ8BYY4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc39bQ8BYY4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ttc39bQ8BYY4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.34■■□□□ 1.49
Ttc39bQ8BYY4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ttc39bQ8BYY4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ttc39bQ8BYY4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.33■■□□□ 1.49
Ttc39bQ8BYY4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ttc39bQ8BYY4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms