Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rhbdd3Q8BP97 Gm37136-201ENSMUST00000194368 194 ntBASIC20.72■□□□□ 0.91
Rhbdd3Q8BP97 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rhbdd3Q8BP97 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rhbdd3Q8BP97 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rhbdd3Q8BP97 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rhbdd3Q8BP97 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Rhbdd3Q8BP97 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rhbdd3Q8BP97 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.71■□□□□ 0.91
Rhbdd3Q8BP97 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rhbdd3Q8BP97 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rhbdd3Q8BP97 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rhbdd3Q8BP97 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rhbdd3Q8BP97 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.7■□□□□ 0.9
Rhbdd3Q8BP97 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rhbdd3Q8BP97 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rhbdd3Q8BP97 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rhbdd3Q8BP97 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rhbdd3Q8BP97 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rhbdd3Q8BP97 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.68■□□□□ 0.9
Rhbdd3Q8BP97 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.67■□□□□ 0.9
Rhbdd3Q8BP97 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rhbdd3Q8BP97 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rhbdd3Q8BP97 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rhbdd3Q8BP97 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rhbdd3Q8BP97 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rhbdd3Q8BP97 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rhbdd3Q8BP97 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rhbdd3Q8BP97 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.66■□□□□ 0.9
Rhbdd3Q8BP97 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rhbdd3Q8BP97 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rhbdd3Q8BP97 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rhbdd3Q8BP97 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.65■□□□□ 0.9
Rhbdd3Q8BP97 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.65■□□□□ 0.9
Rhbdd3Q8BP97 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rhbdd3Q8BP97 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rhbdd3Q8BP97 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rhbdd3Q8BP97 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rhbdd3Q8BP97 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rhbdd3Q8BP97 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rhbdd3Q8BP97 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rhbdd3Q8BP97 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.64■□□□□ 0.89
Rhbdd3Q8BP97 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.64■□□□□ 0.89
Rhbdd3Q8BP97 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rhbdd3Q8BP97 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rhbdd3Q8BP97 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.63■□□□□ 0.89
Rhbdd3Q8BP97 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rhbdd3Q8BP97 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.63■□□□□ 0.89
Rhbdd3Q8BP97 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rhbdd3Q8BP97 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rhbdd3Q8BP97 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rhbdd3Q8BP97 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rhbdd3Q8BP97 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rhbdd3Q8BP97 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rhbdd3Q8BP97 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rhbdd3Q8BP97 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rhbdd3Q8BP97 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rhbdd3Q8BP97 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rhbdd3Q8BP97 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rhbdd3Q8BP97 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rhbdd3Q8BP97 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rhbdd3Q8BP97 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rhbdd3Q8BP97 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rhbdd3Q8BP97 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rhbdd3Q8BP97 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rhbdd3Q8BP97 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rhbdd3Q8BP97 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rhbdd3Q8BP97 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rhbdd3Q8BP97 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rhbdd3Q8BP97 Gm8503-201ENSMUST00000118131 455 ntBASIC20.58■□□□□ 0.89
Rhbdd3Q8BP97 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rhbdd3Q8BP97 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rhbdd3Q8BP97 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rhbdd3Q8BP97 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rhbdd3Q8BP97 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdd3Q8BP97 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdd3Q8BP97 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdd3Q8BP97 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rhbdd3Q8BP97 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdd3Q8BP97 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdd3Q8BP97 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdd3Q8BP97 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdd3Q8BP97 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdd3Q8BP97 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdd3Q8BP97 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdd3Q8BP97 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdd3Q8BP97 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms