Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tspan18Q80WR1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tspan18Q80WR1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.49■■□□□ 1.51
Tspan18Q80WR1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.49■■□□□ 1.51
Tspan18Q80WR1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tspan18Q80WR1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tspan18Q80WR1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tspan18Q80WR1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tspan18Q80WR1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Tspan18Q80WR1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tspan18Q80WR1 Cap2-205ENSMUST00000225824 1634 ntBASIC24.47■■□□□ 1.51
Tspan18Q80WR1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tspan18Q80WR1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tspan18Q80WR1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Tspan18Q80WR1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tspan18Q80WR1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tspan18Q80WR1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tspan18Q80WR1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Tspan18Q80WR1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Gm12366-201ENSMUST00000121722 873 ntBASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Gm5786-201ENSMUST00000085368 882 ntBASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tspan18Q80WR1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tspan18Q80WR1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tspan18Q80WR1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tspan18Q80WR1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tspan18Q80WR1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tspan18Q80WR1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tspan18Q80WR1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.42■■□□□ 1.5
Tspan18Q80WR1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tspan18Q80WR1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tspan18Q80WR1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tspan18Q80WR1 Gm44428-201ENSMUST00000204474 874 ntBASIC24.41■■□□□ 1.5
Tspan18Q80WR1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tspan18Q80WR1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tspan18Q80WR1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tspan18Q80WR1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.4■■□□□ 1.5
Tspan18Q80WR1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tspan18Q80WR1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Tspan18Q80WR1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.39■■□□□ 1.49
Tspan18Q80WR1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
Tspan18Q80WR1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Tspan18Q80WR1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Tspan18Q80WR1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tspan18Q80WR1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
Tspan18Q80WR1 Gm14523-201ENSMUST00000117260 558 ntBASIC24.37■■□□□ 1.49
Tspan18Q80WR1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Tspan18Q80WR1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.37■■□□□ 1.49
Tspan18Q80WR1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tspan18Q80WR1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tspan18Q80WR1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tspan18Q80WR1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Tspan18Q80WR1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Tspan18Q80WR1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tspan18Q80WR1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tspan18Q80WR1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Tspan18Q80WR1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.35■■□□□ 1.49
Tspan18Q80WR1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.35■■□□□ 1.49
Tspan18Q80WR1 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.35■■□□□ 1.49
Tspan18Q80WR1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.34■■□□□ 1.49
Tspan18Q80WR1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Tspan18Q80WR1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tspan18Q80WR1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Tspan18Q80WR1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.33■■□□□ 1.49
Tspan18Q80WR1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Tspan18Q80WR1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.32■■□□□ 1.48
Tspan18Q80WR1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
Tspan18Q80WR1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tspan18Q80WR1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tspan18Q80WR1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
Tspan18Q80WR1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tspan18Q80WR1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tspan18Q80WR1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tspan18Q80WR1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Tspan18Q80WR1 Gm27502-201ENSMUST00000183495 199 ntBASIC24.3■■□□□ 1.48
Tspan18Q80WR1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.3■■□□□ 1.48
Tspan18Q80WR1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tspan18Q80WR1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.29■■□□□ 1.48
Tspan18Q80WR1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tspan18Q80WR1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Tspan18Q80WR1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms