Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.43■■□□□ 1.02
Kcmf1Q80UY2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kcmf1Q80UY2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kcmf1Q80UY2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Kcmf1Q80UY2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kcmf1Q80UY2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Kcmf1Q80UY2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kcmf1Q80UY2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kcmf1Q80UY2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kcmf1Q80UY2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.39■■□□□ 1.01
Kcmf1Q80UY2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Kcmf1Q80UY2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.39■■□□□ 1.01
Kcmf1Q80UY2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kcmf1Q80UY2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kcmf1Q80UY2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kcmf1Q80UY2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kcmf1Q80UY2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kcmf1Q80UY2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kcmf1Q80UY2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kcmf1Q80UY2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kcmf1Q80UY2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kcmf1Q80UY2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kcmf1Q80UY2 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.34■■□□□ 1.01
Kcmf1Q80UY2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kcmf1Q80UY2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kcmf1Q80UY2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kcmf1Q80UY2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.33■■□□□ 1.01
Kcmf1Q80UY2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kcmf1Q80UY2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.33■■□□□ 1
Kcmf1Q80UY2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcmf1Q80UY2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.32■■□□□ 1
Kcmf1Q80UY2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcmf1Q80UY2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.32■■□□□ 1
Kcmf1Q80UY2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.32■■□□□ 1
Kcmf1Q80UY2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.32■■□□□ 1
Kcmf1Q80UY2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcmf1Q80UY2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kcmf1Q80UY2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Kcmf1Q80UY2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcmf1Q80UY2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcmf1Q80UY2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kcmf1Q80UY2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.3■■□□□ 1
Kcmf1Q80UY2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Kcmf1Q80UY2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcmf1Q80UY2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcmf1Q80UY2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.29■■□□□ 1
Kcmf1Q80UY2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcmf1Q80UY2 Terc-201ENSMUST00000082862 423 ntBASIC21.29■■□□□ 1
Kcmf1Q80UY2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kcmf1Q80UY2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kcmf1Q80UY2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kcmf1Q80UY2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcmf1Q80UY2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Kcmf1Q80UY2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcmf1Q80UY2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kcmf1Q80UY2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcmf1Q80UY2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcmf1Q80UY2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Scarna2-201ENSMUST00000157560 414 ntBASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.23■□□□□ 0.99
Kcmf1Q80UY2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kcmf1Q80UY2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.22■□□□□ 0.99
Kcmf1Q80UY2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kcmf1Q80UY2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kcmf1Q80UY2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.21■□□□□ 0.99
Kcmf1Q80UY2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Kcmf1Q80UY2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Kcmf1Q80UY2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Kcmf1Q80UY2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Kcmf1Q80UY2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Kcmf1Q80UY2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcmf1Q80UY2 Gm11175-201ENSMUST00000116172 543 ntBASIC21.2■□□□□ 0.98
Kcmf1Q80UY2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcmf1Q80UY2 Gm9806-201ENSMUST00000051080 552 ntBASIC21.2■□□□□ 0.98
Kcmf1Q80UY2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms