Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm10420-201ENSMUST00000121713 882 ntBASIC24.97■■□□□ 1.59
Ush1gQ80T11 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ush1gQ80T11 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ush1gQ80T11 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
Ush1gQ80T11 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ush1gQ80T11 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.96■■□□□ 1.59
Ush1gQ80T11 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ush1gQ80T11 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.95■■□□□ 1.58
Ush1gQ80T11 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.95■■□□□ 1.58
Ush1gQ80T11 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ush1gQ80T11 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ush1gQ80T11 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ush1gQ80T11 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ush1gQ80T11 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.95■■□□□ 1.58
Ush1gQ80T11 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ush1gQ80T11 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ush1gQ80T11 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ush1gQ80T11 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ush1gQ80T11 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Ush1gQ80T11 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ush1gQ80T11 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Ush1gQ80T11 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Ush1gQ80T11 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.91■■□□□ 1.58
Ush1gQ80T11 Gm5812-201ENSMUST00000061073 957 ntBASIC24.91■■□□□ 1.58
Ush1gQ80T11 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ush1gQ80T11 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ush1gQ80T11 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ush1gQ80T11 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ush1gQ80T11 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.9■■□□□ 1.58
Ush1gQ80T11 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ush1gQ80T11 Gm5921-201ENSMUST00000075898 882 ntBASIC24.9■■□□□ 1.58
Ush1gQ80T11 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ush1gQ80T11 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Ush1gQ80T11 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.89■■□□□ 1.58
Ush1gQ80T11 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ush1gQ80T11 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ush1gQ80T11 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ush1gQ80T11 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ush1gQ80T11 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ush1gQ80T11 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ush1gQ80T11 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ush1gQ80T11 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ush1gQ80T11 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.86■■□□□ 1.57
Ush1gQ80T11 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ush1gQ80T11 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ush1gQ80T11 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ush1gQ80T11 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ush1gQ80T11 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ush1gQ80T11 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ush1gQ80T11 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ush1gQ80T11 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ush1gQ80T11 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.83■■□□□ 1.57
Ush1gQ80T11 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ush1gQ80T11 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.83■■□□□ 1.57
Ush1gQ80T11 Terc-201ENSMUST00000082862 423 ntBASIC24.83■■□□□ 1.57
Ush1gQ80T11 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
Ush1gQ80T11 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ush1gQ80T11 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ush1gQ80T11 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ush1gQ80T11 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ush1gQ80T11 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Ush1gQ80T11 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Ush1gQ80T11 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ush1gQ80T11 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Ush1gQ80T11 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ush1gQ80T11 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ush1gQ80T11 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ush1gQ80T11 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Ush1gQ80T11 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.8■■□□□ 1.56
Ush1gQ80T11 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.8■■□□□ 1.56
Ush1gQ80T11 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ush1gQ80T11 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.79■■□□□ 1.56
Ush1gQ80T11 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ush1gQ80T11 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ush1gQ80T11 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ush1gQ80T11 Gm22567-201ENSMUST00000175542 342 ntBASIC24.78■■□□□ 1.56
Ush1gQ80T11 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ush1gQ80T11 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ush1gQ80T11 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ush1gQ80T11 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.77■■□□□ 1.56
Ush1gQ80T11 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Ush1gQ80T11 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.76■■□□□ 1.55
Ush1gQ80T11 Gm15039-201ENSMUST00000118914 875 ntBASIC24.76■■□□□ 1.55
Ush1gQ80T11 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ush1gQ80T11 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ush1gQ80T11 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ush1gQ80T11 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ush1gQ80T11 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 207.7 ms