Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cnih3Q6ZWS4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnih3Q6ZWS4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cnih3Q6ZWS4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cnih3Q6ZWS4 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.93■□□□□ 0.94
Cnih3Q6ZWS4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cnih3Q6ZWS4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cnih3Q6ZWS4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cnih3Q6ZWS4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cnih3Q6ZWS4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cnih3Q6ZWS4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cnih3Q6ZWS4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cnih3Q6ZWS4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cnih3Q6ZWS4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cnih3Q6ZWS4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Cnih3Q6ZWS4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnih3Q6ZWS4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnih3Q6ZWS4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cnih3Q6ZWS4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cnih3Q6ZWS4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Cnih3Q6ZWS4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cnih3Q6ZWS4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cnih3Q6ZWS4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cnih3Q6ZWS4 Gm30023-201ENSMUST00000197970 889 ntBASIC20.89■□□□□ 0.93
Cnih3Q6ZWS4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cnih3Q6ZWS4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnih3Q6ZWS4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cnih3Q6ZWS4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnih3Q6ZWS4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnih3Q6ZWS4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnih3Q6ZWS4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnih3Q6ZWS4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnih3Q6ZWS4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnih3Q6ZWS4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnih3Q6ZWS4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnih3Q6ZWS4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnih3Q6ZWS4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnih3Q6ZWS4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cnih3Q6ZWS4 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.85■□□□□ 0.93
Cnih3Q6ZWS4 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.85■□□□□ 0.93
Cnih3Q6ZWS4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.84■□□□□ 0.93
Cnih3Q6ZWS4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.84■□□□□ 0.93
Cnih3Q6ZWS4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnih3Q6ZWS4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnih3Q6ZWS4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnih3Q6ZWS4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cnih3Q6ZWS4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cnih3Q6ZWS4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cnih3Q6ZWS4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cnih3Q6ZWS4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cnih3Q6ZWS4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnih3Q6ZWS4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cnih3Q6ZWS4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.81■□□□□ 0.92
Cnih3Q6ZWS4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cnih3Q6ZWS4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnih3Q6ZWS4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cnih3Q6ZWS4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cnih3Q6ZWS4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnih3Q6ZWS4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnih3Q6ZWS4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnih3Q6ZWS4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cnih3Q6ZWS4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.79■□□□□ 0.92
Cnih3Q6ZWS4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.78■□□□□ 0.92
Cnih3Q6ZWS4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cnih3Q6ZWS4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cnih3Q6ZWS4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.78■□□□□ 0.92
Cnih3Q6ZWS4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cnih3Q6ZWS4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnih3Q6ZWS4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnih3Q6ZWS4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnih3Q6ZWS4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnih3Q6ZWS4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cnih3Q6ZWS4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnih3Q6ZWS4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cnih3Q6ZWS4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cnih3Q6ZWS4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cnih3Q6ZWS4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cnih3Q6ZWS4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.76■□□□□ 0.91
Cnih3Q6ZWS4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnih3Q6ZWS4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnih3Q6ZWS4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms