Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Kdm1aQ6ZQ88 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Kdm1aQ6ZQ88 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Kdm1aQ6ZQ88 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Kdm1aQ6ZQ88 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Kdm1aQ6ZQ88 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Kdm1aQ6ZQ88 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kdm1aQ6ZQ88 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Kdm1aQ6ZQ88 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kdm1aQ6ZQ88 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kdm1aQ6ZQ88 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Kdm1aQ6ZQ88 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Kdm1aQ6ZQ88 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kdm1aQ6ZQ88 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kdm1aQ6ZQ88 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Kdm1aQ6ZQ88 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Kdm1aQ6ZQ88 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Kdm1aQ6ZQ88 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Kdm1aQ6ZQ88 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Kdm1aQ6ZQ88 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Kdm1aQ6ZQ88 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Kdm1aQ6ZQ88 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Kdm1aQ6ZQ88 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Kdm1aQ6ZQ88 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Kdm1aQ6ZQ88 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Kdm1aQ6ZQ88 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Kdm1aQ6ZQ88 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Kdm1aQ6ZQ88 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Kdm1aQ6ZQ88 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Kdm1aQ6ZQ88 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Kdm1aQ6ZQ88 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Kdm1aQ6ZQ88 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Kdm1aQ6ZQ88 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.03■■□□□ 1.6
Kdm1aQ6ZQ88 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Kdm1aQ6ZQ88 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Kdm1aQ6ZQ88 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
Kdm1aQ6ZQ88 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Kdm1aQ6ZQ88 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Kdm1aQ6ZQ88 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Kdm1aQ6ZQ88 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25■■□□□ 1.59
Kdm1aQ6ZQ88 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25■■□□□ 1.59
Kdm1aQ6ZQ88 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Kdm1aQ6ZQ88 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25■■□□□ 1.59
Kdm1aQ6ZQ88 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Kdm1aQ6ZQ88 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Kdm1aQ6ZQ88 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Kdm1aQ6ZQ88 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Kdm1aQ6ZQ88 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Kdm1aQ6ZQ88 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Kdm1aQ6ZQ88 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Kdm1aQ6ZQ88 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Kdm1aQ6ZQ88 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Kdm1aQ6ZQ88 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.97■■□□□ 1.59
Kdm1aQ6ZQ88 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kdm1aQ6ZQ88 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kdm1aQ6ZQ88 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kdm1aQ6ZQ88 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kdm1aQ6ZQ88 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Kdm1aQ6ZQ88 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Kdm1aQ6ZQ88 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Kdm1aQ6ZQ88 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.96■■□□□ 1.59
Kdm1aQ6ZQ88 Gm4799-201ENSMUST00000095396 657 ntBASIC24.96■■□□□ 1.59
Kdm1aQ6ZQ88 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Kdm1aQ6ZQ88 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Kdm1aQ6ZQ88 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Kdm1aQ6ZQ88 Gm7432-201ENSMUST00000210343 879 ntBASIC24.95■■□□□ 1.58
Kdm1aQ6ZQ88 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Kdm1aQ6ZQ88 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
Kdm1aQ6ZQ88 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Kdm1aQ6ZQ88 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.94■■□□□ 1.58
Kdm1aQ6ZQ88 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Kdm1aQ6ZQ88 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
Kdm1aQ6ZQ88 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Kdm1aQ6ZQ88 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.93■■□□□ 1.58
Kdm1aQ6ZQ88 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Kdm1aQ6ZQ88 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Kdm1aQ6ZQ88 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Kdm1aQ6ZQ88 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Kdm1aQ6ZQ88 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Kdm1aQ6ZQ88 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Kdm1aQ6ZQ88 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Kdm1aQ6ZQ88 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Kdm1aQ6ZQ88 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.9■■□□□ 1.58
Kdm1aQ6ZQ88 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Kdm1aQ6ZQ88 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Kdm1aQ6ZQ88 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Kdm1aQ6ZQ88 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Kdm1aQ6ZQ88 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.89■■□□□ 1.57
Kdm1aQ6ZQ88 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Kdm1aQ6ZQ88 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Kdm1aQ6ZQ88 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Kdm1aQ6ZQ88 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Kdm1aQ6ZQ88 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Kdm1aQ6ZQ88 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms