Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ParpbpQ6IRT3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.16■□□□□ 0.98
ParpbpQ6IRT3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ParpbpQ6IRT3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ParpbpQ6IRT3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ParpbpQ6IRT3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ParpbpQ6IRT3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ParpbpQ6IRT3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ParpbpQ6IRT3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ParpbpQ6IRT3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ParpbpQ6IRT3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ParpbpQ6IRT3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ParpbpQ6IRT3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ParpbpQ6IRT3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ParpbpQ6IRT3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ParpbpQ6IRT3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ParpbpQ6IRT3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ParpbpQ6IRT3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ParpbpQ6IRT3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ParpbpQ6IRT3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ParpbpQ6IRT3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ParpbpQ6IRT3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ParpbpQ6IRT3 Gm6311-201ENSMUST00000073790 878 ntBASIC21.09■□□□□ 0.97
ParpbpQ6IRT3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.08■□□□□ 0.97
ParpbpQ6IRT3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ParpbpQ6IRT3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.08■□□□□ 0.97
ParpbpQ6IRT3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.08■□□□□ 0.97
ParpbpQ6IRT3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ParpbpQ6IRT3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ParpbpQ6IRT3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ParpbpQ6IRT3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ParpbpQ6IRT3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ParpbpQ6IRT3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.07■□□□□ 0.96
ParpbpQ6IRT3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.07■□□□□ 0.96
ParpbpQ6IRT3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.07■□□□□ 0.96
ParpbpQ6IRT3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ParpbpQ6IRT3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.06■□□□□ 0.96
ParpbpQ6IRT3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ParpbpQ6IRT3 Gm45364-201ENSMUST00000210883 159 ntBASIC21.06■□□□□ 0.96
ParpbpQ6IRT3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ParpbpQ6IRT3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ParpbpQ6IRT3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ParpbpQ6IRT3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
ParpbpQ6IRT3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ParpbpQ6IRT3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ParpbpQ6IRT3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ParpbpQ6IRT3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.04■□□□□ 0.96
ParpbpQ6IRT3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ParpbpQ6IRT3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ParpbpQ6IRT3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.03■□□□□ 0.96
ParpbpQ6IRT3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.03■□□□□ 0.96
ParpbpQ6IRT3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ParpbpQ6IRT3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ParpbpQ6IRT3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ParpbpQ6IRT3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ParpbpQ6IRT3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ParpbpQ6IRT3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ParpbpQ6IRT3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21■□□□□ 0.95
ParpbpQ6IRT3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ParpbpQ6IRT3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ParpbpQ6IRT3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ParpbpQ6IRT3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ParpbpQ6IRT3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ParpbpQ6IRT3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ParpbpQ6IRT3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.99■□□□□ 0.95
ParpbpQ6IRT3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.98■□□□□ 0.95
ParpbpQ6IRT3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ParpbpQ6IRT3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ParpbpQ6IRT3 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.98■□□□□ 0.95
ParpbpQ6IRT3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ParpbpQ6IRT3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ParpbpQ6IRT3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ParpbpQ6IRT3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ParpbpQ6IRT3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ParpbpQ6IRT3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.96■□□□□ 0.95
ParpbpQ6IRT3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms