Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch3Q61982 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch3Q61982 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.3■□□□□ 0.36
Notch3Q61982 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Notch3Q61982 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Notch3Q61982 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Notch3Q61982 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Notch3Q61982 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Notch3Q61982 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.29■□□□□ 0.36
Notch3Q61982 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Notch3Q61982 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.29■□□□□ 0.36
Notch3Q61982 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Notch3Q61982 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Notch3Q61982 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Notch3Q61982 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Notch3Q61982 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Notch3Q61982 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Notch3Q61982 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Notch3Q61982 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Notch3Q61982 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Notch3Q61982 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.26■□□□□ 0.35
Notch3Q61982 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Notch3Q61982 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Notch3Q61982 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Notch3Q61982 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Notch3Q61982 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Notch3Q61982 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Notch3Q61982 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Notch3Q61982 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Notch3Q61982 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.25■□□□□ 0.35
Notch3Q61982 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.25■□□□□ 0.35
Notch3Q61982 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.25■□□□□ 0.35
Notch3Q61982 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Notch3Q61982 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.24■□□□□ 0.35
Notch3Q61982 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Notch3Q61982 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Notch3Q61982 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Notch3Q61982 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Notch3Q61982 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Notch3Q61982 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Notch3Q61982 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Notch3Q61982 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Notch3Q61982 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Notch3Q61982 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Notch3Q61982 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.21■□□□□ 0.35
Notch3Q61982 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Notch3Q61982 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Notch3Q61982 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Notch3Q61982 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Notch3Q61982 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Notch3Q61982 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.2■□□□□ 0.34
Notch3Q61982 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch3Q61982 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.19■□□□□ 0.34
Notch3Q61982 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Notch3Q61982 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch3Q61982 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch3Q61982 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch3Q61982 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.19■□□□□ 0.34
Notch3Q61982 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Notch3Q61982 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.19■□□□□ 0.34
Notch3Q61982 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.19■□□□□ 0.34
Notch3Q61982 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Notch3Q61982 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Notch3Q61982 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Notch3Q61982 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Notch3Q61982 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Notch3Q61982 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Notch3Q61982 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Notch3Q61982 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Notch3Q61982 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Notch3Q61982 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Notch3Q61982 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Notch3Q61982 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Notch3Q61982 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Notch3Q61982 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.15■□□□□ 0.34
Notch3Q61982 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Notch3Q61982 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Notch3Q61982 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Notch3Q61982 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Notch3Q61982 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Notch3Q61982 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Notch3Q61982 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Notch3Q61982 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Notch3Q61982 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Notch3Q61982 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.14■□□□□ 0.33
Notch3Q61982 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Notch3Q61982 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Notch3Q61982 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.14■□□□□ 0.33
Notch3Q61982 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Notch3Q61982 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Notch3Q61982 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.13■□□□□ 0.33
Notch3Q61982 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Notch3Q61982 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Notch3Q61982 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Notch3Q61982 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Notch3Q61982 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Notch3Q61982 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Notch3Q61982 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.12■□□□□ 0.33
Notch3Q61982 Terc-201ENSMUST00000082862 423 ntBASIC17.12■□□□□ 0.33
Notch3Q61982 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms