Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn4Q61418 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn4Q61418 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn4Q61418 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn4Q61418 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn4Q61418 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.74■□□□□ 0.91
Clcn4Q61418 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn4Q61418 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn4Q61418 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.73■□□□□ 0.91
Clcn4Q61418 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn4Q61418 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn4Q61418 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Clcn4Q61418 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn4Q61418 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Clcn4Q61418 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn4Q61418 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn4Q61418 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clcn4Q61418 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn4Q61418 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn4Q61418 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn4Q61418 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn4Q61418 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn4Q61418 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
Clcn4Q61418 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn4Q61418 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn4Q61418 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn4Q61418 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clcn4Q61418 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn4Q61418 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Clcn4Q61418 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clcn4Q61418 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Clcn4Q61418 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Clcn4Q61418 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clcn4Q61418 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn4Q61418 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn4Q61418 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn4Q61418 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn4Q61418 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn4Q61418 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn4Q61418 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn4Q61418 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn4Q61418 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn4Q61418 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Clcn4Q61418 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.64■□□□□ 0.89
Clcn4Q61418 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn4Q61418 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn4Q61418 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn4Q61418 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn4Q61418 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn4Q61418 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn4Q61418 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clcn4Q61418 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.62■□□□□ 0.89
Clcn4Q61418 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.62■□□□□ 0.89
Clcn4Q61418 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.62■□□□□ 0.89
Clcn4Q61418 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn4Q61418 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn4Q61418 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn4Q61418 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn4Q61418 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Clcn4Q61418 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clcn4Q61418 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn4Q61418 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn4Q61418 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn4Q61418 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn4Q61418 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.58■□□□□ 0.89
Clcn4Q61418 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Clcn4Q61418 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Clcn4Q61418 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.57■□□□□ 0.88
Clcn4Q61418 Gm37136-201ENSMUST00000194368 194 ntBASIC20.57■□□□□ 0.88
Clcn4Q61418 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.57■□□□□ 0.88
Clcn4Q61418 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn4Q61418 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.56■□□□□ 0.88
Clcn4Q61418 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn4Q61418 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn4Q61418 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn4Q61418 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn4Q61418 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.56■□□□□ 0.88
Clcn4Q61418 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn4Q61418 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.55■□□□□ 0.88
Clcn4Q61418 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn4Q61418 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn4Q61418 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn4Q61418 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn4Q61418 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
Clcn4Q61418 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clcn4Q61418 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn4Q61418 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn4Q61418 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms